DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30495 and rdh12

DIOPT Version :9

Sequence 1:NP_001260785.1 Gene:CG30495 / 246651 FlyBaseID:FBgn0050495 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001002325.1 Gene:rdh12 / 436597 ZFINID:ZDB-GENE-040718-9 Length:319 Species:Danio rerio


Alignment Length:317 Identity:153/317 - (48%)
Similarity:209/317 - (65%) Gaps:18/317 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IAPVFLAHGIVGIIAFCVRL-------YMQGGKFRKQTDETGKVAIVTGGNTGLGKETVMELARR 68
            :|.|..|.|: |::|..:||       |..||..|......||||:|||.|:|:||||.::||.|
Zfish     2 LALVAFAAGL-GLVALILRLLSPQIRKYAAGGSCRSTVRLDGKVALVTGANSGIGKETALDLASR 65

  Fly    69 GATVYMACRNKEKVERARREIVKETGNSNVFSRECDLSSLDSIRKFAENFKKEQRVLHILINNAG 133
            ||.|.:|||:.||.|.|..||....|.:.|..||.||:...|||.||:.|.:|...|||||||||
Zfish    66 GARVILACRDLEKAEEAAAEIRTRVGGAKVEVRELDLADCCSIRAFAQRFLREVDHLHILINNAG 130

  Fly   134 VFWEPHRLTKEGFEMHLGVNHIGHFLLTNLLLGVLERSAPSRVVVVASRAHERGQIKVDDINSSD 198
            |...|:..|.:||||.:||||:||:|||.||:|:|:||||||:|||:|.||..|.|:..|::|..
Zfish   131 VMMCPYMKTADGFEMQIGVNHLGHYLLTYLLIGLLKRSAPSRIVVVSSLAHNFGWIRFHDLHSQG 195

  Fly   199 FYDEGVAYCQSKLANILFTRELAKRLEGTGVTVNALNPGIADTEIARNMIFFQTKFAQYVVETIL 263
            .|:.|:|||||||||:|||||||:||:|:.||||:::||...:|:.|:.......||.:.:    
Zfish   196 SYNSGLAYCQSKLANVLFTRELARRLQGSNVTVNSVHPGTVRSELVRHSTLMSLLFAFFSM---- 256

  Fly   264 RPLLWAVMKTPKNGAQTTLYAALDPDLERVSGQYFSDCALAPVAPAALDDQMAQWLW 320
                  .:|:||.||||::|.|:..:|:.:||::|||||.|.|||....::.|:.||
Zfish   257 ------FLKSPKEGAQTSIYCAVAEELQSISGKHFSDCAPAFVAPQGRSEETARKLW 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30495NP_001260785.1 FabG 44..296 CDD:223959 128/251 (51%)
NADB_Rossmann 45..323 CDD:304358 141/276 (51%)
rdh12NP_001002325.1 PRK06197 41..318 CDD:235737 141/277 (51%)
NADB_Rossmann 42..310 CDD:304358 141/276 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9897
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.790

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