DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30495 and Ldsdh1

DIOPT Version :10

Sequence 1:NP_001260785.1 Gene:CG30495 / 246651 FlyBaseID:FBgn0050495 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster


Alignment Length:245 Identity:64/245 - (26%)
Similarity:113/245 - (46%) Gaps:37/245 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IVGIIAFCVRLYMQ-----GGKFRKQ--TDETGKVAIVTGGNTGLGKETVMELARRGATVYMACR 77
            :|.|:...|:.::.     .|.||..  .|..|||.::||...|:|||..::.|:.|||:.....
  Fly    26 VVDIVMLIVKFWLAIAEAIVGLFRAPPLDDVNGKVVLITGTGHGMGKEMALQYAKLGATILCWDV 90

  Fly    78 NKEKVERARREIVKETGNS--NVFSRECDLSSLDSIRKFAENFKKEQRVLHILINNAGVFWEP-H 139
            |    |:...:.|||..|:  ..|...|:::..:.:.:.|:..:||...:|:::||||:.  | |
  Fly    91 N----EQTNNQTVKEIKNNGGKAFGYVCNVTKREELIELAQKVRKEHGFIHVVVNNAGIM--PCH 149

  Fly   140 RL---TKEGFEMHLGVNHIGHF-LLTNLLLGVLERSAPSRVVVVASRAHERGQIKVDDINSSDFY 200
            .|   |:....:...:|.:.|| ::...|..::||:..| :|.::|.|...|.|.:         
  Fly   150 PLLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGS-IVALSSCAGLFGLINL--------- 204

  Fly   201 DEGVAYCQSKLA----NILFTRELAKRLEGTGVTVNALNPGIADTEIARN 246
               |.||.:|.|    ......||.::.....|.:..:.|.:.||.:.:|
  Fly   205 ---VPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMIDTGLCKN 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30495NP_001260785.1 Rossmann-fold NAD(P)(+)-binding proteins 45..323 CDD:473865 57/213 (27%)
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 55/211 (26%)

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