DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30495 and RDH12

DIOPT Version :9

Sequence 1:NP_001260785.1 Gene:CG30495 / 246651 FlyBaseID:FBgn0050495 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_689656.2 Gene:RDH12 / 145226 HGNCID:19977 Length:316 Species:Homo sapiens


Alignment Length:318 Identity:155/318 - (48%)
Similarity:196/318 - (61%) Gaps:31/318 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FLQSIAPVFLAHGIVGIIAFCVRLYMQGGKFRKQTDETGKVAIVTGGNTGLGKETVMELARRGAT 71
            ||..:||             .:|.:..||..|......|||.::||.|||:||||..|||.|||.
Human    14 FLYMVAP-------------SIRKFFAGGVCRTNVQLPGKVVVITGANTGIGKETARELASRGAR 65

  Fly    72 VYMACRNKEKVERARREIVKETGNSNVFSRECDLSSLDSIRKFAENFKKEQRVLHILINNAGVFW 136
            ||:|||:..|.|.|..||..:|.||.|..|:.|||...|||.|||.|..|::.||||||||||..
Human    66 VYIACRDVLKGESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMM 130

  Fly   137 EPHRLTKEGFEMHLGVNHIGHFLLTNLLLGVLERSAPSRVVVVASRAHERGQIKVDDINSSDFYD 201
            .|:..|.:|||.||||||:||||||.|||..|:.|||:|||.|:|.||..|:|...|:.|...|.
Human   131 CPYSKTADGFETHLGVNHLGHFLLTYLLLERLKVSAPARVVNVSSVAHHIGKIPFHDLQSEKRYS 195

  Fly   202 EGVAYCQSKLANILFTRELAKRLEGTGVTVNALNPGIADTEIARNMIFFQTKFAQYVVETILRPL 266
            .|.|||.|||||:||||||||||:|||||..|::||:..:|:.|:              :.|..|
Human   196 RGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGVVRSELVRH--------------SSLLCL 246

  Fly   267 LWAV----MKTPKNGAQTTLYAALDPDLERVSGQYFSDCALAPVAPAALDDQMAQWLW 320
            ||.:    :||.:.||||:|:.||...||.:||:|||||....|:|.|.:::.|:.||
Human   247 LWRLFSPFVKTAREGAQTSLHCALAEGLEPLSGKYFSDCKRTWVSPRARNNKTAERLW 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30495NP_001260785.1 FabG 44..296 CDD:223959 135/255 (53%)
NADB_Rossmann 45..323 CDD:304358 147/280 (53%)
RDH12NP_689656.2 retinol-DH_like_SDR_c 39..307 CDD:212495 147/280 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm41333
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.790

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