DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30495 and Rdh13

DIOPT Version :9

Sequence 1:NP_001260785.1 Gene:CG30495 / 246651 FlyBaseID:FBgn0050495 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_780581.1 Gene:Rdh13 / 108841 MGIID:1918732 Length:334 Species:Mus musculus


Alignment Length:327 Identity:145/327 - (44%)
Similarity:206/327 - (62%) Gaps:9/327 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RFLQSIAPVFLAHGIVGIIAFCVRLYMQGGKFRKQTDETGKVAIVTGGNTGLGKETVMELARRGA 70
            |||   .||.:...::|.... ::.|:.||....:....||..||||.|||:||:|.:|||:||.
Mouse     3 RFL---LPVSVVGTVIGGTVL-LKDYVAGGACPSKATIPGKTVIVTGANTGIGKQTALELAKRGG 63

  Fly    71 TVYMACRNKEKVERARREIVKETGNSNVFSRECDLSSLDSIRKFAENFKKEQRVLHILINNAGVF 135
            .|.:|||:.||.|.|.::|..||.|..|.:...||:||.|||:||....||:..:.||:|||.|.
Mouse    64 NVILACRDMEKCEVAAKDIRGETLNPRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAVM 128

  Fly   136 WEPHRLTKEGFEMHLGVNHIGHFLLTNLLLGVLERSAPSRVVVVASRAHERGQIKVDDIN-SSDF 199
            ..||..|::||||..|||::||||||||||..|:.|||||::.::|.||..|.|..:|:| ....
Mouse   129 RCPHWTTEDGFEMQFGVNYLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQMKK 193

  Fly   200 YDEGVAYCQSKLANILFTRELAKRLEGTGVTVNALNPGIADTEIARNMIFFQTKFAQYVVETILR 264
            ||...||||||||.:|||:||:.||:|:|||||||:||:|.||:.|:.....:.|:.:    :|.
Mouse   194 YDTKAAYCQSKLAVVLFTKELSHRLQGSGVTVNALHPGVARTELGRHTGMHNSAFSGF----MLG 254

  Fly   265 PLLWAVMKTPKNGAQTTLYAALDPDLERVSGQYFSDCALAPVAPAALDDQMAQWLWAQSEKWAKI 329
            |..|.:.|:|:..||.:.|.|:..:||.|||:||........:|.|.|:::|:.||.:|.:...:
Mouse   255 PFFWLLFKSPQLAAQPSTYLAVAEELENVSGKYFDGLREKAPSPEAEDEEVARRLWTESARLVGL 319

  Fly   330 AL 331
            |:
Mouse   320 AM 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30495NP_001260785.1 FabG 44..296 CDD:223959 125/252 (50%)
NADB_Rossmann 45..323 CDD:304358 134/278 (48%)
Rdh13NP_780581.1 NADB_Rossmann 38..313 CDD:419666 134/278 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 246 1.000 Domainoid score I2166
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 312 1.000 Inparanoid score I2561
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm43392
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.770

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