DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30495 and rdh11

DIOPT Version :10

Sequence 1:NP_001260785.1 Gene:CG30495 / 246651 FlyBaseID:FBgn0050495 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_031751072.1 Gene:rdh11 / 100485470 XenbaseID:XB-GENE-5943090 Length:327 Species:Xenopus tropicalis


Alignment Length:315 Identity:126/315 - (40%)
Similarity:180/315 - (57%) Gaps:24/315 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VGIIAFCVRLYMQGGKFRKQTDET-------GKVAIVTGGNTGLGKETVMELARRGATVYMACRN 78
            ||:| ..:||     :.||..|.:       ||.|||||.|||:||...|:||||.|.|.:|||:
 Frog    17 VGLI-IILRL-----RRRKPWDPSKCSVSLAGKTAIVTGANTGIGKCVAMDLARRNARVILACRS 75

  Fly    79 KEKVERARREIVKETGNSNVFSRECDLSSLDSIRKFAENFKKEQRVLHILINNAGVFWEPHRLTK 143
            :|:.:||..||.::|||..|.....|.||:.|:|.||:...::::.|.|||||||....||.:|.
 Frog    76 RERGQRALEEIRRQTGNGAVLLEMLDTSSMASVRAFADRILQQEKRLDILINNAGASGLPHSMTA 140

  Fly   144 EGFEMHLGVNHIGHFLLTNLLLGVLERSAPSRVVVVASRAHERGQIKVDDINSSDF--YDEGVAY 206
            ||.|.....||:|.|||||||.|::.:|||||:|.|:|..|:.|:|.:..:...:.  :.....|
 Frog   141 EGLENTFATNHLGPFLLTNLLTGLMRKSAPSRIVFVSSFNHKNGEIHLSCLRGQNIRGFRPDYPY 205

  Fly   207 CQSKLANILFTRELAKRLEGTGVTVNALNPGIADTEIARNMIFFQTKFAQYVVETILRPLLWAVM 271
            ..|||.||:...|.|:||.||||||.:|:|||..||..|....|        :..|.:.:.:...
 Frog   206 NCSKLMNIMCANEFARRLRGTGVTVTSLDPGIVMTEAVRYYSIF--------IRLIFKSIGFFFF 262

  Fly   272 KTPKNGAQTTLYAALDPDLERVSGQYFS-DCALAPVAPAALDDQMAQWLWAQSEK 325
            :||:.||.:|::.|:..:.|.::.:|.. ||.||..:|||.|..:...||...|:
 Frog   263 RTPEEGAVSTIFCAVSEEAEGLTEKYIDCDCMLALPSPAARDPPVTAKLWEACEQ 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30495NP_001260785.1 Rossmann-fold NAD(P)(+)-binding proteins 45..323 CDD:473865 117/280 (42%)
rdh11XP_031751072.1 Rossmann-fold NAD(P)(+)-binding proteins 42..313 CDD:473865 116/278 (42%)

Return to query results.
Submit another query.