DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Coq9 and AT1G19140

DIOPT Version :9

Sequence 1:NP_724594.1 Gene:Coq9 / 246650 FlyBaseID:FBgn0050493 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_973861.1 Gene:AT1G19140 / 838497 AraportID:AT1G19140 Length:312 Species:Arabidopsis thaliana


Alignment Length:331 Identity:98/331 - (29%)
Similarity:155/331 - (46%) Gaps:64/331 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KLIRLQKL---LLPLNATSSRLAPLQPRPLTFLIARSYGKDEKKANLEDFRAREEQRERERDAAD 70
            :|:||.||   ::|.:.||.            |...|.|     .|.|....::...      .:
plant    19 RLLRLPKLRSTIIPSSYTSG------------LCTSSIG-----GNTESPMGKQSVN------PN 60

  Fly    71 QAAEKASQKEAGGGGGLGAKGSESTGPEDDAKQAKVDAIRAKILDAALQHVPQQGWTRQAIILGA 135
            |:...||   :..|.|.|.:..||..|     :|:....:|::|.|:|:|||:.|||.:|::.|:
plant    61 QSGPTAS---SSTGTGEGQRRHESRKP-----RAEFQEEQARVLSASLRHVPRLGWTEEAMMAGS 117

  Fly   136 EESGY-PSVVHGMFPEGGFALVSHFNGKCNAQLVESLQQKTDGGKQEVED--PLDFLVQAVRQRL 197
            .:.|. ||:| |.|.....|||..|..:|    ::.|..:.|.| .::::  |.:.:.:.:|.||
plant   118 RDVGVSPSIV-GSFSRKEAALVEFFMDEC----LQLLMDRIDSG-LDLQNLIPSERISKLIRIRL 176

  Fly   198 EMVTPYKTHWPQAMALLAQPQHAPTALAQVLTLVDDICYYSGDRSVDFGWYTRRVGLATIMKMTE 262
            ||..||.:.||||:::.|.|.:.||:..|...|||:|.:..||.:.|..||.:|..|..:...||
plant   177 EMQVPYMSKWPQALSIQAHPLNVPTSFKQRAMLVDEIWHAVGDGASDLDWYVKRTILGGVYSTTE 241

  Fly   263 LYFLQDKS-PGHAQTWEFLKSRMDEAVQLQMMLSQTE-------------------GMTHTF-QR 306
            :|.|.|.| ..|..||.||..|:.:|..|:..:.:.:                   |:..|. :|
plant   242 IYMLTDDSLAEHRDTWAFLDDRVKDAFDLKKSIQEAKYFAEDIGAGVGKSVQGLMNGVMQTMSRR 306

  Fly   307 SFNSAF 312
            |..|||
plant   307 SGGSAF 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq9NP_724594.1 diverge_rpsU 110..297 CDD:274110 68/190 (36%)
COQ9 217..287 CDD:285683 27/70 (39%)
AT1G19140NP_973861.1 diverge_rpsU 92..277 CDD:274110 68/190 (36%)
COQ9 196..267 CDD:285683 27/70 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3376
eggNOG 1 0.900 - - E1_COG5590
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6477
Inparanoid 1 1.050 123 1.000 Inparanoid score I1963
OMA 1 1.010 - - QHG55764
OrthoDB 1 1.010 - - D1304924at2759
OrthoFinder 1 1.000 - - FOG0006412
OrthoInspector 1 1.000 - - oto4059
orthoMCL 1 0.900 - - OOG6_104041
Panther 1 1.100 - - LDO PTHR21427
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4676
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

Return to query results.
Submit another query.