DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq9 and CG30496

DIOPT Version :9

Sequence 1:NP_724594.1 Gene:Coq9 / 246650 FlyBaseID:FBgn0050493 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_724595.1 Gene:CG30496 / 246652 FlyBaseID:FBgn0050496 Length:635 Species:Drosophila melanogaster


Alignment Length:93 Identity:21/93 - (22%)
Similarity:44/93 - (47%) Gaps:19/93 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NLEDFRAREEQRERERDAADQAAEKASQKEAG------GGGGLGAKGSESTGPEDDAKQAKVDAI 109
            ::..::|.:|:.|:.:.|:|   ::..|::..      ...|:....:||..| |..:|.|:|.:
  Fly   539 SMAHYKAYKERVEKGQSASD---DELMQRQLNMLAVNISNSGMAGGDAESKLP-DIGRQEKLDVL 599

  Fly   110 RAKILDAALQHVPQQGWTRQAIILGAEE 137
            .:.|  .:|:       |.|::.|.|.|
  Fly   600 ASSI--TSLE-------TLQSLYLRARE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq9NP_724594.1 diverge_rpsU 110..297 CDD:274110 7/28 (25%)
COQ9 217..287 CDD:285683
CG30496NP_724595.1 Kinetochor_Ybp2 2..551 CDD:285737 2/11 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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