DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-p and cyp27b1

DIOPT Version :9

Sequence 1:NP_001286304.1 Gene:Cyp12d1-p / 246648 FlyBaseID:FBgn0050489 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001298720.1 Gene:cyp27b1 / 793309 ZFINID:ZDB-GENE-111005-2 Length:505 Species:Danio rerio


Alignment Length:503 Identity:137/503 - (27%)
Similarity:245/503 - (48%) Gaps:53/503 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TEEHKTYDEIPRPNKFKFMR-AFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFN 99
            |.:.||.:::|.|:..:|:| .||..|   .:.:.:.....|::||.::  ...||....|....
Zfish    35 TPQVKTLEQMPGPSPARFIRDLFMKRG---FSRLHQLQLEGRQKYGPMW--KASFGPILTVHVAE 94

  Fly   100 TKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRG 164
            .:.|:.|.|.||..|.|..|.|...:|.     :.||..||:.::.|.|..:||.::...::|:.
Zfish    95 PELIQQVLRQEGQHPVRSELSSWKDYRA-----LRGEGYGLLTAEGEEWQCVRSLLSKHMLRPQA 154

  Fly   165 LRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNS 229
            :..|...|:.:.::.::::|......:..:..|.:.|..|...|.:..|.|:.::|.:       
Zfish   155 VEAYDGALNAVVSDLLQKLKLRSQESSSRIVSDISAEFYRFGLEGISSVLFESRIGCL------- 212

  Fly   230 DALTLFQTSRDI------FRLTFKLDIQPSMW--KIISTP--TYRKMKRTLNDSL--NVAQKMLK 282
            ||:...:|.|.|      |.:|. |.:....|  :::..|  |:.:....:.:..  ::.|::.:
Zfish   213 DAVVPVETERFIQSINTMFVMTL-LTMAMPQWLHRLLPKPWDTFCRCWDVMFEFAKGHIDQRLQE 276

  Fly   283 ENQDALEKRRQAGEKINSNSMLERLMEID-PKVAVIMSL-DILFAGVDATATLLSAVLLCLSKHP 345
            |.|     :.:.||::....:...|.:.. |..:|..:: ::|.||||..::.||..|..||:||
Zfish   277 EKQ-----KLECGEQLEGRYLTYFLSQAGLPLTSVYSNVTELLLAGVDTISSTLSWSLYELSRHP 336

  Fly   346 DKQAKLREELLSIMPTKD-SLLNEENMKDMPYLRAVIKETLRYYPNGLGTMRTCQNDVILSGYRV 409
            |.|..||:|:||:|  || |:....::..||.|:||:||.||.||......|....|:.:.||.:
Zfish   337 DVQTALRDEVLSVM--KDRSVPQASDVAAMPLLKAVVKEILRLYPVIPANARVINKDIEVGGYVI 399

  Fly   410 PKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVS-PFTFLPFGFGPRMCIGKRVV 473
            ||.|.:.|......::...:..||.|.|:||      |.:...| |:..:|||.|.|.|||:|:.
Zfish   400 PKNTLITLCHYATSRDPQQFRDPDSFRPQRW------GDRSDRSHPYATVPFGVGKRSCIGRRIA 458

  Fly   474 DLEMETTVAKLIRNFHVEFNR--DASRPF-KTMFVMEPAITFPFKFTD 518
            :||:...:::::.:|.:|..|  |...|. :|:.|.|..|  ..:||:
Zfish   459 ELEVYLALSRILMHFTMEPVRENDTVHPMTRTLLVPERQI--DLRFTE 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-pNP_001286304.1 p450 70..508 CDD:299894 123/456 (27%)
cyp27b1NP_001298720.1 p450 45..493 CDD:278495 129/478 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2609
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3547
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6352
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.980

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