DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-p and Cyp4f16

DIOPT Version :9

Sequence 1:NP_001286304.1 Gene:Cyp12d1-p / 246648 FlyBaseID:FBgn0050489 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001343232.1 Gene:Cyp4f16 / 70101 MGIID:1917351 Length:524 Species:Mus musculus


Alignment Length:386 Identity:85/386 - (22%)
Similarity:166/386 - (43%) Gaps:63/386 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GLVASQNEAWGKLRSAINPIF----MQP------RGLRMYYEPLSNINNEFIERIKEIRDPKTLE 193
            ||..|..:.|.:.|..:.|.|    ::|      :.:.:.:....::::|...|:          
Mouse   135 GLFLSSGDKWSRHRRLLTPAFHFDILKPYVKIFNQSVNIMHAKWKHLSSEGSARL---------- 189

  Fly   194 VPEDFTDEISRLVFESLG--LVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSM-- 254
               :..:.||.:..:||.  |..||       .|...|.: .......::..|..|..:|..:  
Mouse   190 ---EMFEHISLMTLDSLQKCLFGFD-------SNCQESPS-EYISAILELSSLIIKRSLQLFLFV 243

  Fly   255 -WKIISTPTYRKMKRTLNDSLNVAQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIM 318
             :....|...|:.::..:...|....:::|.:..|..:.. .|.:.|.:..:.|..||   .:::
Mouse   244 DFLYYHTADGRRFRKACDLVHNFTDAVIRERRHTLSSQNH-DEFLKSKTKSKTLDFID---VLLL 304

  Fly   319 SLD-----------------ILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKD-SL 365
            :.|                 .:|.|.|.||:.||.:|..|::||:.|.:.|:|:..::..:: ..
Mouse   305 AKDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVQELLRDREPEE 369

  Fly   366 LNEENMKDMPYLRAVIKETLRYYPNGLGTMRTCQNDVIL-SGYRVPKGTTVLLGSNVLMKEATYY 429
            :..:::..:|:|...|||:||.:...:..:|.|..|::| .|..:|||...::....:....:.:
Mouse   370 IEWDDLAQLPFLTMCIKESLRLHSPVIDLLRRCTRDIVLPDGRVIPKGNICVISIFGIHHNPSVW 434

  Fly   430 PRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHV 490
            |.|:.:.|.|:  |||..:|.  ||..|:||..|||.|||:.....||:..:|..:..|.:
Mouse   435 PDPEVYDPFRF--DPENPQKR--SPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRI 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-pNP_001286304.1 p450 70..508 CDD:299894 85/386 (22%)
Cyp4f16NP_001343232.1 p450 52..514 CDD:306555 85/386 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.