DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-p and cyp46a1.4

DIOPT Version :9

Sequence 1:NP_001286304.1 Gene:Cyp12d1-p / 246648 FlyBaseID:FBgn0050489 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_005160404.1 Gene:cyp46a1.4 / 393451 ZFINID:ZDB-GENE-040426-1224 Length:501 Species:Danio rerio


Alignment Length:526 Identity:117/526 - (22%)
Similarity:211/526 - (40%) Gaps:120/526 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDI 103
            |:.||.||.|.:..|:....|             |..:..|.|..::..:|  ..|...:..   
Zfish    32 HQKYDHIPGPPRDNFLFGHSP-------------SLTKSMYADDSLIHDLF--LQWAEKYGP--- 78

  Fly   104 EMVFRNEGIWPRRDGLDSIVYFREHVR-----------------PDVYGEV----------QGLV 141
              |:|          ::|:.|....|.                 |.||..:          .||:
Zfish    79 --VYR----------INSLHYIAIVVHCPEATKTILMSPKYTKDPFVYRRLFNLFGKRFLGYGLI 131

  Fly   142 -ASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRL 205
             |..::.|.:.|..::|.|.... ||........::...:::::|:.:.||   |....|.::.:
Zfish   132 TAVDHDIWYRQRRIMDPAFSSSY-LRSLISTFDEMSERLMDKLEEMANNKT---PAVMHDLVNCV 192

  Fly   206 VFESLGLVAFDRQMG-LIRKNRDNSDALTLFQTS-----RDIFRLTFKLDIQPSMWKII-----S 259
            ..:.:..|||...:. |.:|:....:|:.|....     ||.|...|     |..||:|     :
Zfish   193 TLDVICKVAFGVDLNFLAQKDSPFQNAVELCLNGMTVDLRDPFFRLF-----PKNWKLIHQIRDA 252

  Fly   260 TPTYRK--------MKRTLNDSLNVAQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAV 316
            ....||        .|..:.:..:|.:.:|.:...:.|:     |.:|:...||::::       
Zfish   253 AELLRKTGEKWIQNRKTAVKNGEDVPKDILTQILKSAEE-----ENVNNTDDLEQMLD------- 305

  Fly   317 IMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVI 381
             ..:....||.:.||..||..::.|.::|:...:.:.|:..::.||..:.||: :....||..|:
Zfish   306 -NFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTKREISNED-LGKFTYLSQVL 368

  Fly   382 KETLRYYPNGLGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPET 446
            |||||.||...||.|....|::::|.::|.|.:|:..|.|..:...::..|.:|.|||:  |...
Zfish   369 KETLRLYPTAPGTNRWLHEDMVINGIKIPGGCSVMFSSYVSQRLEKFFKDPLKFDPERF--DVNA 431

  Fly   447 GKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFVMEPAIT 511
            .|..    :.:.||..|||.|:|:....:|.:..:|||::.|.              |.:.|..:
Zfish   432 PKPY----YCYFPFALGPRTCLGQVFSQMEAKVVLAKLLQRFE--------------FSLVPGQS 478

  Fly   512 FPFKFT 517
            |..|.|
Zfish   479 FDIKDT 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-pNP_001286304.1 p450 70..508 CDD:299894 105/484 (22%)
cyp46a1.4XP_005160404.1 p450 39..495 CDD:278495 113/519 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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