DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-p and cyp-37B1

DIOPT Version :9

Sequence 1:NP_001286304.1 Gene:Cyp12d1-p / 246648 FlyBaseID:FBgn0050489 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_507109.1 Gene:cyp-37B1 / 180093 WormBaseID:WBGene00009226 Length:509 Species:Caenorhabditis elegans


Alignment Length:514 Identity:117/514 - (22%)
Similarity:220/514 - (42%) Gaps:98/514 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 FKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMV-------FR 108
            :|:||.|  .|.:....|           |.:| |..:|.    ::.|.|:.:|:.       ..
 Worm    33 YKYMRKF--DGPYSFPII-----------GTLY-MVNIFD----ISKFTTQSMELAQYYCQKGCG 79

  Fly   109 NEGIWPRRDGLDSIVYFREHVRP-----DVYGEVQ-----------GLVASQNEAWGKLRSAINP 157
            ..|:|.....|.:::. .:|.:.     :|..:.:           ||:.|....|.:.|..:.|
 Worm    80 TIGLWLGPVPLIAVIN-PQHAKEILESNEVITKAEEYDILFPWLGTGLLTSTGSKWRQRRKMLTP 143

  Fly   158 IFMQPRGLRMYYEPLSNI-------NNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAF 215
            .|        :::.|::.       ...|:|:||...| ...||  |....|.||..:    |..
 Worm   144 AF--------HFKVLNDFLSVHDYQAKVFLEQIKPYAD-SGKEV--DLFPYIKRLALD----VIC 193

  Fly   216 DRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQP-----SMWKIISTPTYRKMKRTLNDSLN 275
            |..||:....::|.|. ...::.|.:....|:..::|     .:|.:  |....:..|.|....:
 Worm   194 DTSMGVTIDAQNNHDH-QYVESVRLLSEYAFEWILRPWLRLKPLWYL--TGPGHEYDRHLKIVTD 255

  Fly   276 VAQKMLKENQDALEK-RRQAGEKINSNSM--LERLMEIDPKVAVIMSLD--------ILFAGVDA 329
            ..:.::||..:..:| ......|.:..||  |:.|:|:  :...:|:.|        .:|.|.|.
 Worm   256 FTKTVIKEKWEEFQKFHVDPVVKTDKRSMAFLDLLLEL--RNEGLMNEDDIREEVDTFMFEGHDT 318

  Fly   330 TATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGLGT 394
            |:..:...|.||:.:|:.|.|:.:|:..|..|.|.....:::|.|.||...:||:||.||:....
 Worm   319 TSASMGWTLWCLAHNPEFQEKVIQEVDGIFGTSDRDCTNDDLKQMKYLEKCLKESLRMYPSVPFF 383

  Fly   395 MRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLP 459
            .||.:.||:::|...|||..:::...:|.:....:..|:::.||.:..| :.|.:   ..::.:|
 Worm   384 GRTVEQDVVINGDFFPKGVRIIVMPLLLQRNPLIFDNPNQYNPENFSED-KIGSR---HAYSDIP 444

  Fly   460 FGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPF---KTM--FVMEPAITFP 513
            |..|||.|||::...:|.:..::...|.:.|    .||:||   |.:  .:::.::.||
 Worm   445 FSAGPRNCIGQKFAMMEEKAVISWFFRKYRV----TASQPFGMNKILPELILKSSLGFP 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-pNP_001286304.1 p450 70..508 CDD:299894 109/488 (22%)
cyp-37B1NP_507109.1 p450 41..475 CDD:278495 105/474 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4770
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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