DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-p and Cyp46a1

DIOPT Version :9

Sequence 1:NP_001286304.1 Gene:Cyp12d1-p / 246648 FlyBaseID:FBgn0050489 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_034140.1 Gene:Cyp46a1 / 13116 MGIID:1341877 Length:500 Species:Mus musculus


Alignment Length:517 Identity:124/517 - (23%)
Similarity:229/517 - (44%) Gaps:71/517 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMP---------GGEFQNASITEYTSAMRK 77
            ||.:||.....:.:......|:.||.|.:..|:...:|         |...|:..:.     ..|
Mouse    10 SAVLLAFGLCCTFVHRARSRYEHIPGPPRPSFLLGHLPYFWKKDEDCGRVLQDVFLD-----WAK 69

  Fly    78 RYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGE---VQG 139
            :||.: |...:|.:...:.|    ..|.|  .:.:...:...||.:|   .....|:||   .||
Mouse    70 KYGPV-VRVNVFYKTSVIVT----SPESV--KKFLMSTKYNKDSKMY---RALQTVFGERLFGQG 124

  Fly   140 LVASQNEA-WGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKT-LEVPEDFTDEI 202
            ||:..:.. |.|.|..::..|.     |.....|....||..|::.||.:.|. .:.|....|.:
Mouse   125 LVSECDYGRWYKQRKVMDLAFS-----RSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDML 184

  Fly   203 SRLVFESLGLVAFDRQMG-LIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKM 266
            :....:.|...||..:.. |:...:..|.|:.:........|.|        :.|.:  |..||.
Mouse   185 TCATIDILAKAAFGMETSMLLGAQKPLSQAVKVMLEGISASRNT--------LAKFM--PGKRKQ 239

  Fly   267 KRTLNDSLNVAQKMLKENQDALEKRRQA---GEKINSNSMLERLMEI-----DPKVAVIMSLDIL 323
            .|.:.:|:.:.:::   .:|.:::||:|   ||.:.:: :|.::::.     |.:|.:...:...
Mouse   240 LREIRESIRLLRQV---GKDWVQRRREALKRGEDMPAD-ILTQILKAEEGAQDDEVLLDNFVTFF 300

  Fly   324 FAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYY 388
            .||.:.:|..|:..::.||:.|:..|:|:.|:..::.:|.. |:.|::..:.||..|:||:||.|
Mouse   301 IAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKRH-LDYEDLGRLQYLSQVLKESLRLY 364

  Fly   389 PNGLGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVS 453
            |...||.|..:.:.::.|.|||..|.:|..:.|:.:..||:..|..|.|:|:      |......
Mouse   365 PPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF------GPGAPKP 423

  Fly   454 PFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPF-----KTMFVMEPAI 510
            .||:.||..|.|.|||::...:|::..:|||::  .:||.....:.|     .|:..::|.:
Mouse   424 RFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQ--RIEFRLVPGQRFGLQEQATLKPLDPVL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-pNP_001286304.1 p450 70..508 CDD:299894 111/456 (24%)
Cyp46a1NP_034140.1 p450 34..466 CDD:278495 115/474 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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