DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12d1-p and LOC100498621

DIOPT Version :9

Sequence 1:NP_001286304.1 Gene:Cyp12d1-p / 246648 FlyBaseID:FBgn0050489 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_002933245.2 Gene:LOC100498621 / 100498621 -ID:- Length:504 Species:Xenopus tropicalis


Alignment Length:506 Identity:117/506 - (23%)
Similarity:216/506 - (42%) Gaps:88/506 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HKTYDEIPRPNKFKFMRAFMP--GGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDW------V 95
            |..||:||.|.:..|:...:|  ....:|.|:..          |:::        .|      |
 Frog    39 HLKYDDIPGPPRDSFLLGHIPTLSKAEENYSVVH----------DLFL--------HWAEIYGPV 85

  Fly    96 TTFNTKDIEMVFRN--EGIWPRRDGLDSIVYFREHVRPDVYGEV----------QGLVAS-QNEA 147
            ...|.....|::..  |.:   ::.|.|..|.::   |..|.::          :||:.. .::.
 Frog    86 FKINILHRVMIYSTSPESV---KECLMSSKYPKD---PYTYNQLFNLFGKRFLGKGLLTDPDHDH 144

  Fly   148 WGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEIS------RLV 206
            |...|..::|.|.     ..|.:.:..|.||..|::.|     .||...|...|:|      |:.
 Frog   145 WYHQRRIMDPAFS-----NTYLKEMIGIFNERAEQMME-----KLEEKADGHQEVSMHSIINRVT 199

  Fly   207 FESLGLVAFDRQMGLIRKNR-DNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTL 270
            .:.:..|||...:||:..|: |..:|::...|....:.....:...|..|..:         |.:
 Frog   200 LDVITKVAFGMDLGLVEGNKTDFPNAISKVLTGMMRYMQNPYMQYFPKHWAFV---------REV 255

  Fly   271 NDSLNVAQKMLKENQDALEKRRQAGEKINSNSMLERLME-------IDPKVAVIMSLDILFAGVD 328
            .:|.::.:|..||.....:|..|.||:: ...:|.::::       :|.::.:...:....||.:
 Frog   256 QESADLLRKTGKECISQRKKAMQNGEEL-PKDILTKILQCAELENALDDEIMLDNFITFFIAGQE 319

  Fly   329 ATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGLG 393
            .||..||..::.|::.|:...|||.|:..::..|.. ::.::::::.|:..|:||:||:||.|.|
 Frog   320 TTANQLSFTVMELTRQPEIMTKLRMEVDEVIGFKRD-ISYDDIQNLNYMTQVLKESLRFYPPGPG 383

  Fly   394 TMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSP-FTF 457
            |.|..:.|.|..|.::|.|.::...:.|:.:...::..|.:|       |||......|.| |.:
 Frog   384 TSRYLKEDTIFEGIKIPGGVSITFNTYVMGRMEKFFQDPCKF-------DPERFHPAAVKPYFCY 441

  Fly   458 LPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFVMEP 508
            .||..|||.|:|:....||.:..::|||:.|..|.....|...|....:.|
 Frog   442 FPFALGPRSCLGQIFSQLEAKVILSKLIQRFEFELVPGQSFGIKDTGTLRP 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-pNP_001286304.1 p450 70..508 CDD:299894 106/471 (23%)
LOC100498621XP_002933245.2 CYP46A1-like 72..498 CDD:410706 107/473 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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