DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12d1-p and LOC100488078

DIOPT Version :9

Sequence 1:NP_001286304.1 Gene:Cyp12d1-p / 246648 FlyBaseID:FBgn0050489 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_012817051.1 Gene:LOC100488078 / 100488078 -ID:- Length:510 Species:Xenopus tropicalis


Alignment Length:445 Identity:104/445 - (23%)
Similarity:187/445 - (42%) Gaps:80/445 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 FNT--KDIEMVFRNEGIWP---------------------------RRDGLDSIVYFREHVRPDV 133
            |||  ||::::......:|                           |:|..|...|:  .:.|.:
 Frog    62 FNTDGKDMDIIMNYAKKYPYAYPMWLGNFFASLIICHPDYAKAILSRQDPKDDFGYY--FLTPWI 124

  Fly   134 YGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIER-IKEIRDPKTLEVPED 197
               .:||:....:.|.:.|..:.|.|... .|:.|.:.:::.:|..::: .|||.|.|    |.:
 Frog   125 ---GKGLLVLSGQKWFQHRRLLTPAFHYD-VLKPYVKLMADCSNVMLDKWDKEISDKK----PVE 181

  Fly   198 FTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDI-FRLTFKLDIQPSMWKIISTP 261
            ....:|.:..:|:...||..... .:.|.:|.....:::.|..: .|.|| |.........:|..
 Frog   182 LFHHVSLMTLDSIMKCAFSYHSN-CQNNSENKYIKAVYELSYLVDHRFTF-LPYHSDFIFYLSPH 244

  Fly   262 TYRKMKRTLNDSLNVAQKMLKENQDALEKRRQAGEKINSNSMLERL------------------- 307
            .:| .:|.|..:.:...|::|:.:.:|.::.:. |||.....|:.|                   
 Frog   245 GFR-FRRALKVAHDHTDKVIKQRKKSLHEQNEL-EKIQQKRHLDFLDILLCAKDENGKGLSDEDL 307

  Fly   308 -MEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENM 371
             .|:|         ..:|.|.|.||:.:|..|.|::|:|:.|.|.|||:..::..|.: ::.:::
 Frog   308 RAEVD---------TFMFEGHDTTASGISWTLYCMAKYPEHQQKCREEIRDVLGGKQT-VDWDDL 362

  Fly   372 KDMPYLRAVIKETLRYYPNGLGTMRTCQNDV-ILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEF 435
            ..|||....|||:||.||...|..|.....: ...|..:||.:.|||....:.:.::.:..|:.|
 Frog   363 GKMPYTTLCIKESLRLYPPVPGIARQLTQPITFCDGRSLPKDSMVLLSLYAINRCSSIWEDPEVF 427

  Fly   436 LPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHV 490
            .|.|:  ..|...|.  :...||||..|.|.|||:.....||:..:|..::.|.:
 Frog   428 DPMRF--SAENSAKR--NSHAFLPFSAGSRNCIGQNFAMNEMKVALALTLQRFEL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-pNP_001286304.1 p450 70..508 CDD:299894 104/445 (23%)
LOC100488078XP_012817051.1 p450 48..502 CDD:278495 104/445 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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