DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment antr and Crisp1

DIOPT Version :9

Sequence 1:NP_001246284.1 Gene:antr / 246647 FlyBaseID:FBgn0050488 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001034482.2 Gene:Crisp1 / 654517 RGDID:1590757 Length:254 Species:Rattus norvegicus


Alignment Length:203 Identity:43/203 - (21%)
Similarity:67/203 - (33%) Gaps:60/203 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 NYSVAAR-MPTMGWDFELQRLADRQVRQCDET----------GKFCA-NTDKYHYVATTEIRSKM 135
            |.|..|| |..|.|.......|....|.||::          ..||. |....:|          
  Rat    59 NVSPPARNMLKMSWSSAAAENARILARYCDKSDSDSLERRLPNTFCGENMHMENY---------- 113

  Fly   136 GRTKSLKSAILDKLLPELFLDVMGCMMNSQKLVPVREGTCVG------HYMPLIQDHGSRMGCGL 194
                           |..:.:|:....|..|.....|.....      ||..::......:||.:
  Rat   114 ---------------PSSWSNVIEIWYNESKYFKYGEWPSTDDDIETYHYTQMVWASSYLIGCDV 163

  Fly   195 RVKGRDEKESNIILLCHF-----SRASVNNLVPYEEGQIPAGKCATGPSQMYQFLCSE-----DE 249
             ...|.:|.:..:.:||:     |:.::|  :||:||. |...|   |:.....||:.     ||
  Rat   164 -ASCRRQKAATYLYVCHYCHEGNSQDTLN--MPYKEGP-PCQDC---PNNCEDGLCTNPCLYYDE 221

  Fly   250 YVDANSMV 257
            |.:.:..|
  Rat   222 YNNCDKQV 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antrNP_001246284.1 SCP_euk 63..213 CDD:240180 28/152 (18%)
Crisp1NP_001034482.2 SCP 46..182 CDD:294090 28/148 (19%)
Crisp 200..254 CDD:285731 8/33 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344728
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.