DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment antr and crisp1.3

DIOPT Version :9

Sequence 1:NP_001246284.1 Gene:antr / 246647 FlyBaseID:FBgn0050488 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001008204.1 Gene:crisp1.3 / 493566 XenbaseID:XB-GENE-951048 Length:240 Species:Xenopus tropicalis


Alignment Length:83 Identity:21/83 - (25%)
Similarity:31/83 - (37%) Gaps:13/83 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 PVREGTCVGHYMPLIQDHGSRMGCGLRVKGRDEKESNIILLCHFSRASVNNL-----VPYEEGQI 228
            |...|...|||..::..:...:||.  |....:.......:|.:..|  .||     .||:.|. 
 Frog   126 PKSPGLVTGHYTQVMWYNSYMVGCS--VSYCPKSPYKYFYVCQYCPA--GNLDSTMSTPYKTGP- 185

  Fly   229 PAGKCATGPSQMYQFLCS 246
               |||..|:.....||:
 Frog   186 ---KCADCPTACDNGLCT 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antrNP_001246284.1 SCP_euk 63..213 CDD:240180 9/43 (21%)
crisp1.3NP_001008204.1 CAP_CRISP 33..170 CDD:349402 9/45 (20%)
Crisp 187..240 CDD:369954 5/14 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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