DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment antr and crisp1.7

DIOPT Version :10

Sequence 1:NP_001246284.1 Gene:antr / 246647 FlyBaseID:FBgn0050488 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_989314.1 Gene:crisp1.7 / 394939 XenbaseID:XB-GENE-5779195 Length:244 Species:Xenopus tropicalis


Alignment Length:217 Identity:45/217 - (20%)
Similarity:75/217 - (34%) Gaps:71/217 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 AARMPTMGWDFELQRLADRQVRQCDETGKFCANTDKYH-YVATTEIRS-KMGRTKSLKS--AILD 147
            |:.|..|.|..|.:..|......|::          || ..|..:|.: ..|....:.|  |..:
 Frog    52 ASNMLKMSWSIEAENNAKNWATTCNQ----------YHSQPAARQIANITCGENLFMSSYPASWE 106

  Fly   148 KLLPELFLDV------MGCMMNSQKLVPVREGTCVGHYMPLIQDHGSRMGC--------GLRVKG 198
            :::..|..:.      :|.     |.|    |..:|||..::.....|:||        |:|:| 
 Frog   107 EVIQSLHSEYDNFEYGVGA-----KAV----GLVIGHYTQVMWYKSYRIGCYCTECPNDGVRLK- 161

  Fly   199 RDEKESNIILLCHFSRAS-----VNNLVPYEEGQIPAGKCATGPSQMYQFLCS-----EDEYVDA 253
                   ...:|.:..|.     :|  .||:.|.    .||..|......||:     ||:|.:.
 Frog   162 -------YYYVCQYYPAGNYADRIN--YPYKSGP----SCADCPDACDNGLCTNPCPYEDQYSNC 213

  Fly   254 NSM----------VVESNMPSS 265
            :.:          :|:...|.|
 Frog   214 DDLASGDQCDTYQIVKEGCPGS 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antrNP_001246284.1 CAP_euk 63..213 CDD:349399 29/143 (20%)
crisp1.7NP_989314.1 CAP_CRISP 32..171 CDD:349402 29/145 (20%)
Crisp 188..243 CDD:462519 11/48 (23%)

Return to query results.
Submit another query.