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Protein Alignment antr and R3hdml
DIOPT Version :9
Sequence 1: | NP_001246284.1 |
Gene: | antr / 246647 |
FlyBaseID: | FBgn0050488 |
Length: | 272 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102432.1 |
Gene: | R3hdml / 366245 |
RGDID: | 1305296 |
Length: | 253 |
Species: | Rattus norvegicus |
Alignment Length: | 192 |
Identity: | 43/192 - (22%) |
Similarity: | 72/192 - (37%) |
Gaps: | 41/192 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 NYVASGVGNYSVAARMPTMGWDFELQRLADRQVRQC------DETGKFCANTDKYH---YVATTE 130
|::.:.| :..|:.|..|.||.:|.|.|:....|| .:..|:.......| |.:..:
Rat 71 NHIRASV--HPPASNMEYMVWDEQLARAAEAWATQCIWAHGPSQLTKYVGQNLSVHSGRYRSVVD 133
Fly 131 IRSKMGRTKSLKSAILDKLLPELFLDVMGCMMNSQKLVPVREGTCVGHYMPLIQDHGSRMGC--- 192
:.......|...| |.....|..:...|. .|....||..::....||:||
Rat 134 LVKSWSEEKRHYS----------FPAPKDCTPHCPWLC---SGPVCSHYTQMVWASSSRLGCAIH 185
Fly 193 ---GLRVKGRDEKESNIILLCHFSRASVNNLV---PYEEGQIPAGKCATGPSQMYQFLCSED 248
.:.|.|...::: :.|:|:: |...|.: ||:.|: |...|. || ||..|:.:
Rat 186 TCSSINVWGSTWQQA-VYLVCNY--AIKGNWIGEAPYKTGK-PCSACP--PS--YQGNCNSN 239
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
antr | NP_001246284.1 |
SCP_euk |
63..213 |
CDD:240180 |
31/152 (20%) |
R3hdml | NP_001102432.1 |
SCP |
65..207 |
CDD:294090 |
31/151 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166344644 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2340 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.750 |
|
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