DRSC/TRiP Functional Genomics Resources

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Protein Alignment antr and scl-17

DIOPT Version :10

Sequence 1:NP_001246284.1 Gene:antr / 246647 FlyBaseID:FBgn0050488 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:239 Identity:48/239 - (20%)
Similarity:81/239 - (33%) Gaps:63/239 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 NNLFLNVNGALKTGILSRINMLRNYVASGVG-----NYSVAARMPTMGWDFELQRLADRQVRQCD 111
            ||...:.:|..:|  |...|..|:.:|.|..     .::.|..:..|.|:..:...|.....:|.
 Worm    15 NNAQFDKSGVQQT--LDAHNEFRSSIAKGTYVTKGLLHAPATNIMKMKWNVTIATAAQNHANKCP 77

  Fly   112 E---------------TGKFCANTDKYHYVATTEIRSKMGRTKSLKSAILDKLLPELFLDVMGCM 161
            :               :|...|:....|..|..........||  |....|.:..|.|       
 Worm    78 KGHDGPLEGVSGECMWSGHINASKGVNHLGAVAAKAWSSEYTK--KGWETDVMSDEFF------- 133

  Fly   162 MNSQKLVPVREGTCVGHYMPLIQDHGSRMGCGLRVKGRDEKESNIILLC-HFSRASVNNLVPYEE 225
             ||.          |||.:.:.......:|||:::..::......|::| ::.....|..:.||.
 Worm   134 -NSG----------VGHAIIMTWYSQVNVGCGVKLCQKEGDYQLAIVVCKYWGEGQGNGKIMYES 187

  Fly   226 GQI-----PAGKC--ATG---------PSQMYQFLCSEDEYVDA 253
            |..     |...|  |||         |..:|::    ||.|::
 Worm   188 GPTCSACPPNTTCDQATGLCDSKIPDIPEPIYKY----DELVNS 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antrNP_001246284.1 CAP_euk 63..213 CDD:349399 31/170 (18%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 31/170 (18%)

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