DRSC/TRiP Functional Genomics Resources

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Protein Alignment antr and scl-8

DIOPT Version :9

Sequence 1:NP_001246284.1 Gene:antr / 246647 FlyBaseID:FBgn0050488 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_502510.1 Gene:scl-8 / 183345 WormBaseID:WBGene00008030 Length:210 Species:Caenorhabditis elegans


Alignment Length:241 Identity:57/241 - (23%)
Similarity:85/241 - (35%) Gaps:70/241 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VGCFQPKAVGEQCGKNNLFLNVNGALKTGILSRINMLRNYVASGVGNYSVAARMPTMGWDFELQR 101
            |.|....|...:.||.:: ||.:..:::.|..     .||||.|....| |..|..|.||..|::
 Worm     9 VACVGVYAQFSEGGKQSI-LNAHNDIRSRIAK-----GNYVAKGNRKES-ATNMLKMKWDSSLEQ 66

  Fly   102 LADRQVRQC-------DET----------GKFCANTDKYHYVATTEIRSKMGRTKSLKSAILDKL 149
            .|......|       |:|          |...::.||:..:||.....:.              
 Worm    67 SAQNYANGCHMQHSTNDKTIGENLYWEWSGDPFSDLDKFGKIATVAWDHEF-------------- 117

  Fly   150 LPELFLDVMGCMMNSQKLVPVREGTCVGHYMPLIQDHGSRMGCGLRVKGRDEKES---NIILLCH 211
              |.|      ..||.|.......|.|.|...:......::|||::..|||.:..   .:.::|.
 Worm   118 --EQF------GWNSNKFSLALFNTGVAHATQIAWAPTGKIGCGVKNCGRDARRGGLFQVAIVCQ 174

  Fly   212 FSRASVN----NLVPYEEG----QIPAG-KC--ATGPSQMYQFLCS 246
            : |...|    |:  |..|    ..||| .|  :||       ||:
 Worm   175 Y-RVRGNFFFKNI--YNSGATCSACPAGTSCEQSTG-------LCA 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antrNP_001246284.1 SCP_euk 63..213 CDD:240180 37/169 (22%)
scl-8NP_502510.1 SCP 22..175 CDD:214553 41/181 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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