DRSC/TRiP Functional Genomics Resources

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Protein Alignment antr and scl-3

DIOPT Version :9

Sequence 1:NP_001246284.1 Gene:antr / 246647 FlyBaseID:FBgn0050488 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_502504.1 Gene:scl-3 / 178252 WormBaseID:WBGene00009896 Length:211 Species:Caenorhabditis elegans


Alignment Length:194 Identity:42/194 - (21%)
Similarity:69/194 - (35%) Gaps:35/194 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LNVNGALKTGILSRINMLRNYVASGVGNYSVAARMPTMGWDFELQRLADRQVRQCDETGKFCANT 120
            ::::..|:|.|..     ..|||.|. ..:..:.:..|.||..|...|......|.......|..
 Worm    29 VDLHNKLRTSIAK-----GTYVAKGT-TKAAGSNLLKMKWDTTLATAAQTFANTCPRGHSNAAGV 87

  Fly   121 DKYHYVATTEIRSKMGRTKSLKSAILD------KLLPELFLDVMGCMMN--SQKLVPVREGTCVG 177
            .:..|          .|..||..:.:|      .:..|......|...|  :|.|.    .|.:|
 Worm    88 GENLY----------WRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTTNTFTQALA----NTGIG 138

  Fly   178 HYMPLIQDHGSRMGCGLRVKGRDEKESN---IILLCHFSRASVNNLVP--YEEGQIPAGKCATG 236
            |...:...:...:|||::..|.|.:.:|   .:::|.: :|..|.|..  |:.| .....|.||
 Worm   139 HATQMAWANTGLIGCGVKNCGPDPELNNYNRAVVVCQY-KAQGNYLGQDIYKSG-TTCSACPTG 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antrNP_001246284.1 SCP_euk 63..213 CDD:240180 33/160 (21%)
scl-3NP_502504.1 SCP 23..176 CDD:214553 34/166 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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