DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment antr and crisp1.6

DIOPT Version :9

Sequence 1:NP_001246284.1 Gene:antr / 246647 FlyBaseID:FBgn0050488 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_002933627.1 Gene:crisp1.6 / 100379939 XenbaseID:XB-GENE-5838744 Length:237 Species:Xenopus tropicalis


Alignment Length:103 Identity:24/103 - (23%)
Similarity:38/103 - (36%) Gaps:19/103 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 PVREGTCVGHYMPLIQDHGSRMGCGLRVKGRDEKESNIILLCHFSRASVNNL----VPYEEGQIP 229
            |.......|||..|:..:...:||.:     ....:..|.:|.:.... |||    .||:.|  |
 Frog   125 PTSSNQVTGHYTQLVWYNSYMVGCAV-----SNCNNQYIYVCQYCPMG-NNLNTITTPYKSG--P 181

  Fly   230 AGKCATGPSQMYQFLCS-----EDEYVDANSMVVESNM 262
            |  |...|......||:     :|.|...::.:...|:
 Frog   182 A--CGDCPGACDNGLCTNPCPYQDMYSGCSNYIAYCNL 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antrNP_001246284.1 SCP_euk 63..213 CDD:240180 9/43 (21%)
crisp1.6XP_002933627.1 CAP_CRISP 32..166 CDD:349402 9/45 (20%)
Crisp 183..236 CDD:369954 7/35 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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