DRSC/TRiP Functional Genomics Resources

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Protein Alignment antr and R3hdml

DIOPT Version :10

Sequence 1:NP_001246284.1 Gene:antr / 246647 FlyBaseID:FBgn0050488 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001092801.1 Gene:R3hdml / 100043899 MGIID:3650937 Length:253 Species:Mus musculus


Alignment Length:196 Identity:44/196 - (22%)
Similarity:78/196 - (39%) Gaps:49/196 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 NYVASGVGNYSVAARMPTMGWDFELQRLADRQVRQCDETGKFCANTDKYHYVATTEIRSKMGRTK 139
            |::.:.|  :..||.|..|.||.:|.|.|:....||..|          |  ..:::...:|:..
Mouse    71 NHIRASV--HPPAANMEYMVWDEQLARSAEAWATQCIWT----------H--GPSQLMKYVGQNL 121

  Fly   140 SLKSAILDKLLPELFLDVMGCMMNSQK---------LVPVREGTCVG----HYMPLIQDHGSRMG 191
            |:.|.....:     :|::......::         ..|.....|.|    ||..::....||:|
Mouse   122 SIHSGRFRSV-----VDLVRSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMVWASSSRLG 181

  Fly   192 C------GLRVKGRDEKESNIILLCHFSRASVNNLV---PYEEGQIPAGKCATGPSQMYQFLCSE 247
            |      .:.|.|...::: :.|:|::  |...|.:   ||:.|: |...|.  ||  ||..|:.
Mouse   182 CAINTCSSINVWGNTWQQA-VYLVCNY--AIKGNWIGEAPYKAGK-PCSACP--PS--YQGNCNS 238

  Fly   248 D 248
            :
Mouse   239 N 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
antrNP_001246284.1 CAP_euk 63..213 CDD:349399 32/156 (21%)
R3hdmlNP_001092801.1 CAP_R3HDML 63..208 CDD:349409 32/158 (20%)

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