DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and Crispld1

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001343480.1 Gene:Crispld1 / 83691 MGIID:1934666 Length:500 Species:Mus musculus


Alignment Length:228 Identity:50/228 - (21%)
Similarity:78/228 - (34%) Gaps:70/228 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DFRNTVAKGQYPHLRPASRMATLRWHEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIYGSTKW 134
            |..|.:....||   .||.|..:.|..||...|:.....|                       .|
Mouse    67 DLHNKLRSQVYP---TASNMEYMTWDVELERSAESWAEMC-----------------------LW 105

  Fly   135 LQLEKDPISVL-----------------DFVLQFWMDDVKGCTMAHINAEKPAKDGQCRG----Y 178
               |..|.|:|                 .|.:|.|.|:|:..:..:.|...|....:|.|    :
Mouse   106 ---EHGPASLLPSIGQNLGAHWGRYRPPTFHVQAWYDEVRDFSYPYENECDPYCPFRCSGPVCTH 167

  Fly   179 FTQLVQDLAAHVGCAMMLRK-----GQ--TSGLYQYGVLCHFS-RGKIANELVYRASAHPGSRC- 234
            :||:|...::.:|||:.|..     ||  ...:|   ::|::| :|.......|: ...|.|.| 
Mouse   168 YTQVVWATSSRIGCAVNLCHNMNIWGQIWPKAVY---LVCNYSPKGNWWGHAPYK-HGRPCSACP 228

  Fly   235 --YAGTHSIYEGLCSPE---EHVNPNALQLGEL 262
              :.|  ...|.||..|   .:..|...:..|:
Mouse   229 PSFGG--GCRENLCYKEGSDRYYTPREEETNEI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 37/171 (22%)
Crispld1NP_001343480.1 CAP_CRISPLD1 62..207 CDD:349407 37/171 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..281 1/2 (50%)
LCCL 291..375 CDD:128866
LCCL 394..492 CDD:367672
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841242
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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