DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30486 and PR-1-LIKE

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_179589.1 Gene:PR-1-LIKE / 816518 AraportID:AT2G19990 Length:176 Species:Arabidopsis thaliana


Alignment Length:156 Identity:31/156 - (19%)
Similarity:54/156 - (34%) Gaps:44/156 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LAVLNDFRNTVAKGQYPHLRPASRMATLRWHEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIY 129
            |.|.|..|..|..|            .:.|:|.||          .|...|.........:.:..
plant    46 LVVHNKARAMVGVG------------PMVWNETLA----------TYAQSYAHERARDCAMKHSL 88

  Fly   130 G------STKWLQLEKDPISVLDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRGYFTQLVQDLAA 188
            |      :..|..: ..|::.     ::||.:.:.   ...::.....||.| |::||:|...:.
plant    89 GPFGENLAAGWGTM-SGPVAT-----EYWMTEKEN---YDYDSNTCGGDGVC-GHYTQIVWRDSV 143

  Fly   189 HVGCAMMLRKGQTSGLYQY-GVLCHF 213
            .:|||.:..|..     :| .|:|.:
plant   144 RLGCASVRCKND-----EYIWVICSY 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 31/156 (20%)
PR-1-LIKENP_179589.1 CAP_PR-1 42..176 CDD:349400 31/156 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.