DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30486 and Crispld2

DIOPT Version :10

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001297564.1 Gene:Crispld2 / 78892 MGIID:1926142 Length:495 Species:Mus musculus


Alignment Length:242 Identity:60/242 - (24%)
Similarity:85/242 - (35%) Gaps:76/242 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PMHMRAHLLAVLNDFRNTVAKGQYPHLRPASRMATLRWHEELAGLAKFALRRCDYIDDYCSNTDE 121
            ||..|..:|.:.|..|..|    ||   |||.|..:.|.|||...|.....||            
Mouse    52 PMSDRQEILMLHNKLRGQV----YP---PASNMEHMTWDEELERSAAAWAHRC------------ 97

  Fly   122 FSYVSYIYGSTKWLQLEKDPISVL-----------------DFVLQFWMDDVKGCTMAHINAEKP 169
                       .|   |..|..:|                 .|.:|.|.|:||..|..:.:...|
Mouse    98 -----------LW---EHGPAGLLRSIGQNLAVHWGRYRSPGFHVQSWYDEVKDYTYPYPHECTP 148

  Fly   170 AKDGQCRG----YFTQLVQDLAAHVGCAM-----MLRKGQT--SGLYQYGVLCHFS-RGKIANEL 222
            ....:|.|    ::||:|......:|||:     |...|.|  :.:|   ::|::| :|....|.
Mouse   149 RCRERCSGPMCTHYTQMVWATTNKIGCAVHTCRNMNVWGDTWENAVY---LVCNYSPKGNWIGEA 210

  Fly   223 VYRASAHPGSRC---YAGTHSIYEGLC----SPEEHVNPNALQLGEL 262
            .|: ...|.|.|   |.|  .....||    .|.:| .|....:.|:
Mouse   211 PYK-HGRPCSECPSSYGG--GCLNNLCHRAEKPHKH-KPEVDMMNEV 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 CAP_euk 61..214 CDD:349399 43/180 (24%)
Crispld2NP_001297564.1 CAP 56..201 CDD:412178 43/180 (24%)
LCCL 284..368 CDD:128866
LCCL 387..486 CDD:427521
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.