DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and r3hdml

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001373427.1 Gene:r3hdml / 561976 ZFINID:ZDB-GENE-090313-275 Length:252 Species:Danio rerio


Alignment Length:221 Identity:51/221 - (23%)
Similarity:88/221 - (39%) Gaps:65/221 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LAVLNDFRNTVAKGQYPHLRPASRMATLRWHEELAGLAKFALRRC-------DYIDDYCSNTDEF 122
            :..|.|:.|.|....:|   ||:.|..:.|.|.||..|:|...:|       .::.....|    
Zfish    66 MTALLDYHNRVRSQVFP---PAANMEYMVWDERLAKSAEFWASQCIWEHGPHHFLQHIGQN---- 123

  Fly   123 SYVSYIYGSTKWLQLEKDPISVLDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRG----YFTQLV 183
              :|.|.|..|         |::|.| :.|.|:      .| :...|::   |.|    ::||:|
Zfish   124 --LSIISGRYK---------SIIDLV-KSWYDE------RH-SFSYPSR---CSGSVCTHYTQMV 166

  Fly   184 QDLAAHVGCAMMLRKGQTSGLYQYG--------VLCHFS-RGKIANELVYRASAHPGSRCYAGTH 239
            ...:..:|||:.    :.|.::.:|        ::|::: :|....|..|:. ..|.|.|    .
Zfish   167 WAASNKIGCAIK----KCSDIFVFGSMWKQATLLVCNYAIKGNWVGEAPYKI-GRPCSAC----P 222

  Fly   240 SIYEGLCS-------PEEHVNPNALQ 258
            |.|.|.|:       |:...|.|..:
Zfish   223 SSYGGSCNKNQCDSRPKSRRNTNGFR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 38/167 (23%)
r3hdmlNP_001373427.1 CAP_R3HDML 66..201 CDD:349409 38/167 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585760
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I5251
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.800

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