Protein Alignment CG30486 and R3hdml

DIOPT Version :10

• Sequence 1: NP_725234.2
• Gene: CG30486 / 246645
• FlyBaseID: FBgn0050486
• Length: 263
• Species: Drosophila melanogaster
• Sequence 2: NP_001102432.1
• Gene: R3hdml / 366245
• RGDID: 1305296
• Length: 253
• Species: Rattus norvegicus
• Alignment Length: 214
• Identity: 51/214 - (23%)
• Similarity: 84/214 - (39%)
• Gaps: 58/214 - (27%)

  Fly    59 HMRAHLLAVLNDFRNTVAKGQYPHLRPASRMATLRWHEELAGLAKFALRRCDYIDDYCSNTDEFS 123
            |:.|..:..|.|:.|.:....:|   |||.|..:.|.|:||..|:....:|.:.......|   .
  Rat    57 HISARDMNALLDYHNHIRASVHP---PASNMEYMVWDEQLARAAEAWATQCIWAHGPSQLT---K 115

  Fly   124 YV----SYIYGSTKWLQLEKDPISVLDFVLQFWMDD--------VKGCTMAHINAEKPAKDGQCR 176
            ||    |...|..:         ||:|.| :.|.::        .|.||        |.....|.
  Rat   116 YVGQNLSVHSGRYR---------SVVDLV-KSWSEEKRHYSFPAPKDCT--------PHCPWLCS 162

  Fly   177 G----YFTQLVQDLAAHVGCAMMLRKGQTSGLYQYG--------VLCHFS-RGKIANELVYRASA 228
            |    ::||:|...::.:|||:    ...|.:..:|        ::|::: :|....|..|:.
  Rat   163 GPVCSHYTQMVWASSSRLGCAI----HTCSSINVWGSTWQQAVYLVCNYAIKGNWIGEAPYKT-- 221

  Fly   229 HPGSRCYAGTHSIYEGLCS 247
              |..|.|...| |:|.|:
  Rat   222 --GKPCSACPPS-YQGNCN 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG30486	NP_725234.2	CAP_euk	61..214	CDD:349399	40/176 (23%)
R3hdml	NP_001102432.1	CAP_R3HDML	63..208	CDD:349409	39/172 (23%)