DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and scl-20

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_507655.1 Gene:scl-20 / 191309 WormBaseID:WBGene00013972 Length:212 Species:Caenorhabditis elegans


Alignment Length:207 Identity:51/207 - (24%)
Similarity:79/207 - (38%) Gaps:57/207 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NDFRNTVAKGQY-------PHLRPASRMATLRWHEELAGLAKFALRRCDYIDDYCSNTDEFSYVS 126
            |..|:.:|.|.|       |   ||..|..::|...|||:||.....|..:     .||     |
 Worm    33 NSLRSQLANGDYVVDGVPKP---PAKDMMKMKWDPILAGMAKNNAATCPSL-----FTD-----S 84

  Fly   127 YIYGSTKWLQLEKDPISVLD----FVLQFWMDDVKGCTMAHINAEKPAKDGQCRGY--------F 179
            .:.|...:.:|.......||    |.::.|....:         |:..|:.:.|.:        .
 Worm    85 KMLGRNYYHRLANVTSGSLDKYALFAVKKWERQFQ---------ERGWKNQEFRMFGDHRLLTSA 140

  Fly   180 TQLVQDLAAHVGCAMMLRKGQTSGLYQYG----VLCHF-SRGKIANELVYR----ASAHPGS-RC 234
            ||:|.....||||.:.:...: ..|:.|.    |:|.: |:|.|....:|:    .||.|.| :|
 Worm   141 TQMVWATTRHVGCGVNICDAE-KNLFGYRNKVVVICEYQSKGNIHGLPIYKEGPTCSACPASTKC 204

  Fly   235 YAGTHSIYEGLC 246
            ...:     |||
 Worm   205 ERRS-----GLC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 39/168 (23%)
scl-20NP_507655.1 SCP 23..177 CDD:214553 39/166 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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