DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and scl-17

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:248 Identity:53/248 - (21%)
Similarity:81/248 - (32%) Gaps:95/248 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NYGDFDESCGSEAIIMKFPMHMRAHLLAVLNDFRNTVAKGQYP-----HLRPASRMATLRWHEEL 98
            |...||:|...:.        :.||     |:||:::|||.|.     | .||:.:..::|:..:
 Worm    15 NNAQFDKSGVQQT--------LDAH-----NEFRSSIAKGTYVTKGLLH-APATNIMKMKWNVTI 65

  Fly    99 AGLAKFALRRCDYIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISVLDFVLQFWMDDVKGCTMAH 163
            |..|:....:|....|        ..:..:.|...|                          ..|
 Worm    66 ATAAQNHANKCPKGHD--------GPLEGVSGECMW--------------------------SGH 96

  Fly   164 INAEKP------------AKDGQCRGYFTQLVQD----------------LAAHVGCAMMLRKGQ 200
            |||.|.            :.:...:|:.|.::.|                ...:|||.:.|  .|
 Worm    97 INASKGVNHLGAVAAKAWSSEYTKKGWETDVMSDEFFNSGVGHAIIMTWYSQVNVGCGVKL--CQ 159

  Fly   201 TSGLYQYG-VLCHF-----SRGKIANELVYRASA-HPGSRCYAGTHSIYEGLC 246
            ..|.||.. |:|.:     ..|||..|.....|| .|.:.|...|     |||
 Worm   160 KEGDYQLAIVVCKYWGEGQGNGKIMYESGPTCSACPPNTTCDQAT-----GLC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 37/191 (19%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 37/198 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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