DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30486 and scl-25

DIOPT Version :10

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_507364.1 Gene:scl-25 / 188600 WormBaseID:WBGene00011841 Length:212 Species:Caenorhabditis elegans


Alignment Length:200 Identity:43/200 - (21%)
Similarity:72/200 - (36%) Gaps:58/200 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 HLLAVLNDFRNTVAKGQYPH--LRPASRMATLRWHEELAGLA---KFALRRCDYIDDYCSNTDEF 122
            :::.:.|..||..:.|.:..  :..:|.|..|.|:|.|...|   |:          ||...|. 
 Worm    33 NIVFIHNKLRNAASHGLWERHSISKSSNMQLLSWNESLVAEAENEKY----------YCEPADN- 86

  Fly   123 SYVSYIYGSTKWLQLEKDPISVLDFVLQF---WMDDVKGC-TMAHINAE---------KPAKDGQ 174
                           :..||.:.|.:.|:   ..||:.|. .|..||.:         |.||:  
 Worm    87 ---------------KNLPIKLGDNIYQYDVNTYDDIDGVGAMGSINKDTHDALKSEAKAAKN-- 134

  Fly   175 CRGYFTQLVQDLAAHVGCAM-MLRKGQTSGLYQYG---VLCHFS--RGKIANELVYRASAHPGSR 233
               ...|::...:..:||.. ...|..:.|: .|.   ::|.:|  ...|..:|..:  ..|.|.
 Worm   135 ---RLRQMLYSKSKSIGCIYESCDKIDSKGI-NYNTRLLICKYSPPLENIDEKLFDK--GEPCSN 193

  Fly   234 CYAGT 238
            |.:||
 Worm   194 CPSGT 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 CAP_euk 61..214 CDD:349399 35/172 (20%)
scl-25NP_507364.1 CAP_euk 31..174 CDD:349399 35/172 (20%)

Return to query results.
Submit another query.