DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and scl-18

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:205 Identity:45/205 - (21%)
Similarity:76/205 - (37%) Gaps:53/205 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NDFRNTVAKGQYPHLRPASRMA-----TLRWHEELAGLA-KFALRRCDYIDDYCSNTDEFSYVSY 127
            |:.|:.:|.|.:...|...|.|     ...|:..|...| .||.:          |..:.|::..
 Worm    46 NNIRSQLAFGNFVTKRHTKRAAGSNIKKFVWNATLERSAYSFAQK----------NPSQHSFIPD 100

  Fly   128 I------YGSTKWLQLEK-DPISVLDFVLQ----FW-----MDDVKGCTMAHINAEKPAKDGQCR 176
            |      :.||:.....| .|::.|.::.:    ||     .:|:.|..:.|.            
 Worm   101 IGENLFWHWSTRPGDFNKYGPMAALSWIKEFREKFWDSNILTNDLFGSGVGHA------------ 153

  Fly   177 GYFTQLVQDLAAHVGCAMM----LRKGQTSGLYQYGVLCHF-SRGKIANELVYRASAHPGSRCYA 236
               ||:|......:|||:.    :.|.....:.:..|:||: .:|...||.:| ....|.|:|.:
 Worm   154 ---TQMVWADTYQMGCAVSHFKEIHKRTGRPITKICVVCHYWPKGNYLNEPIY-LEGPPCSKCES 214

  Fly   237 GTHSIYEGLC 246
            .......|||
 Worm   215 KKCDKRTGLC 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 35/171 (20%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 35/171 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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