DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and scl-12

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_504056.1 Gene:scl-12 / 186714 WormBaseID:WBGene00019178 Length:208 Species:Caenorhabditis elegans


Alignment Length:233 Identity:49/233 - (21%)
Similarity:88/233 - (37%) Gaps:66/233 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 MKFPMHM--------------------RAHLLAVLNDFRNTVAKGQY-------PHLRPASRMAT 91
            |||.:::                    :||     ||.|:.:|.|.|       |   ||:.|..
 Worm     1 MKFALYLIAIFGCATAQFSSTAQTAIVKAH-----NDLRSAIALGNYDAAGTIEP---PAANMRK 57

  Fly    92 LRWHEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISVLDF---VLQFWM 153
            ::|...:|..|:.....|.  ||: |.|:   |...:|    |......|.|:..|   ....|.
 Worm    58 IKWDSTVASSAQQYANTCP--DDH-SGTE---YGENLY----WSWSSSAPTSLDKFGVAASNSWE 112

  Fly   154 DDVK--GCTMAHINAEKPAKDGQCRGYFTQLVQDLAAHVGCAMML--RKGQTSGLYQYGVLCHFS 214
            .:.:  |....:::|:  ..|... |:.||:.......:||.:..  :....:.:|:..|:|.:.
 Worm   113 KEFQDYGWESTYMDAD--LFDSGI-GHATQMAWAETNKIGCGVKNCGKDSSMNNMYKVAVVCQYD 174

  Fly   215 R-GKIANELVYRAS-----AHPGSRCYAGTHSIYEGLC 246
            : |.:.:..:|::.     ...||:|...:     |||
 Worm   175 QAGNMMDSDIYQSGDTCSFCPSGSKCEEAS-----GLC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 38/166 (23%)
scl-12NP_504056.1 SCP 21..175 CDD:214553 38/174 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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