DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30486 and scl-15

DIOPT Version :10

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_494496.1 Gene:scl-15 / 184099 WormBaseID:WBGene00017183 Length:207 Species:Caenorhabditis elegans


Alignment Length:242 Identity:54/242 - (22%)
Similarity:82/242 - (33%) Gaps:86/242 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YGDFDESCGSEAIIMKFPMHMRAHLLAVLNDFRNTVAKGQY----PHLRPASRMATLRWHEELAG 100
            ||.|.:: |.:||:       .||     |..|:::|||.|    ....|.|.:..::|...:|.
 Worm    16 YGQFSKA-GQKAIV-------DAH-----NTLRSSIAKGTYVANKTRKEPGSNILKMKWDPTIAK 67

  Fly   101 LAKFALRRC----------------------DYIDDY---CSNTDEFSYVSYIYGSTKWLQLEKD 140
            .|:.....|                      ..||||   .|......:..|.:.:.|       
 Worm    68 SAQAYANTCPTGHGKSKYGENLYWRWSGAVIKSIDDYGVRASGAWASEFQKYGWKTNK------- 125

  Fly   141 PISVLDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRGYFTQLVQDLAAHVGCAMMLRKGQTSGLY 205
                ||..|                    .|.|  .|:.||:.......:||.:.......:.:|
 Worm   126 ----LDSAL--------------------FKTG--IGHATQMAWASTGSIGCGVKNCGMDKNKMY 164

  Fly   206 QYGVLCHFS-RGKIANELVYRA----SAHPG-SRCYAGTHSIYEGLC 246
            :..|:|.:| ||.:.|..:|.|    ||.|. ::|...|     |||
 Worm   165 KVAVVCQYSARGNMINNNIYTAGKTCSACPAKTKCEKAT-----GLC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 CAP_euk 61..214 CDD:349399 34/181 (19%)
scl-15NP_494496.1 SCP 22..173 CDD:214553 37/196 (19%)

Return to query results.
Submit another query.