DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30486 and scl-7

DIOPT Version :10

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_502509.1 Gene:scl-7 / 183344 WormBaseID:WBGene00008029 Length:209 Species:Caenorhabditis elegans


Alignment Length:222 Identity:52/222 - (23%)
Similarity:87/222 - (39%) Gaps:41/222 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YGDFDESCGSEAIIMKFPMHMRAHLLAVLNDFRNTVAKGQY----PHLRPASRMATLRWHEELAG 100
            :..|.|. |.::::       .||     |..|:::|||:|    .....|:.|..::|...||.
 Worm    15 HAQFSEG-GKQSMV-------NAH-----NAVRSSIAKGEYVAKGTKKDSATNMLKMKWDNSLAQ 66

  Fly   101 LAKFALRRCDYIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISVLDFVLQFWMDD-VKGCTMAHI 164
            .|:.....|.     ..::.:.|     ||...:......||:.||..:|..:|. |....|...
 Worm    67 SAQNYANGCP-----MQHSPDKS-----YGENLFWAYSSSPITDLDKYVQSAVDTWVSEFQMFGW 121

  Fly   165 NAEK--PAKDGQCRGYFTQLVQDLAAHVGCAMMLRKGQTS---GLYQYGVLCHFSRGKIANELVY 224
            |:.|  .|......|:.||:.......|||... ..|..|   |.|:..::|.:   |:....::
 Worm   122 NSNKFTTALWNTGIGHATQVAWSATGQVGCGAK-NCGADSVRVGSYKATIVCQY---KVPGNYLF 182

  Fly   225 RASAHPGSRCY---AGTH-SIYEGLCS 247
            :...:.|::|.   |||. ....|||:
 Worm   183 KNIYNSGAKCSACPAGTSCEQSSGLCA 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 CAP_euk 61..214 CDD:349399 40/162 (25%)
scl-7NP_502509.1 SCP 22..174 CDD:214553 41/174 (24%)

Return to query results.
Submit another query.