DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and scl-5

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_502506.1 Gene:scl-5 / 178253 WormBaseID:WBGene00008027 Length:208 Species:Caenorhabditis elegans


Alignment Length:215 Identity:48/215 - (22%)
Similarity:82/215 - (38%) Gaps:46/215 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KFPMHMRAHLLAVLNDFRNTVAKGQY---PHLRP-ASRMATLRWHEELAGLAKFALRRCD----- 110
            :|..:.:|.:|.|.|..|:.:|||.|   ...:| ||.|..::|...:|..|:....:|.     
 Worm    18 QFSANGQAAILNVHNTLRSRIAKGTYVAKGTAKPAASDMLKMKWDATVAASAQAYANKCPTGHSG 82

  Fly   111 -----------YIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISVLDFVLQFWMDDVKGCTMAHI 164
                       :.....:|.|:|...    ||..|   ||      :|....|..:....::.:.
 Worm    83 AAGLGENLYWYWTSATITNIDQFGAT----GSAAW---EK------EFQDYGWSSNTLSMSLFNT 134

  Fly   165 NAEKPAKDGQCRGYFTQLVQDLAAHVGCAMMLRKGQTSGLYQYGVLCHFS-RGKIANELVYRASA 228
            ..          |:.||:.......:||.:......|:|..:..|:|.:. :|...|:.:| .|.
 Worm   135 GI----------GHATQMAWAKTNLIGCGVKNCGKDTNGFNKVTVVCQYKPQGNYLNQNIY-TSG 188

  Fly   229 HPGSRCYAGTH-SIYEGLCS 247
            ...|:|.:||. ....|||:
 Worm   189 TTCSKCPSGTSCEAATGLCA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 36/172 (21%)
scl-5NP_502506.1 SCP 22..175 CDD:214553 36/175 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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