DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and r3hdml

DIOPT Version :9

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:194 Identity:51/194 - (26%)
Similarity:85/194 - (43%) Gaps:30/194 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LAVLNDFRNTVAKGQYPHLRPASRMATLRWHEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIY 129
            ::.|.|:.|.|....:|   ||:.|..:.|.|.||..|:....:|.:  |:..|    ..:.|| 
 Frog    63 MSALLDYHNQVRSKVFP---PAANMEYMVWDERLAKSAESWANQCKW--DHGPN----QLMRYI- 117

  Fly   130 GSTKWLQLEKDPI-SVLDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRG----YFTQLVQDLAAH 189
            |..  |.:..... |::|.| :.|.|:.:..:..|.....|:...:|.|    ::||:|...:..
 Frog   118 GQN--LSVHSGRYRSIVDLV-KGWYDERQHYSFPHPRECNPSCPNKCTGAVCTHYTQMVWASSNR 179

  Fly   190 VGCAMMLRK-----GQTSGLYQYGVLCHFS-RGKIANELVYRASAHPGSRCYAGTHSIYEGLCS 247
            :|||:.:..     |.|.....| ::|::| :|....|..|:.    |..|.|...| |.|:||
 Frog   180 IGCAVNICTNINVWGSTWRQASY-LVCNYSIKGNWIGEAPYKL----GRPCSACPPS-YGGVCS 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 SCP_euk 61..214 CDD:240180 39/158 (25%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 39/158 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I5157
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.060

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