DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30486 and r3hdml

DIOPT Version :10

Sequence 1:NP_725234.2 Gene:CG30486 / 246645 FlyBaseID:FBgn0050486 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:194 Identity:51/194 - (26%)
Similarity:85/194 - (43%) Gaps:30/194 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LAVLNDFRNTVAKGQYPHLRPASRMATLRWHEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIY 129
            ::.|.|:.|.|....:|   ||:.|..:.|.|.||..|:....:|.:  |:..|    ..:.|| 
 Frog    63 MSALLDYHNQVRSKVFP---PAANMEYMVWDERLAKSAESWANQCKW--DHGPN----QLMRYI- 117

  Fly   130 GSTKWLQLEKDPI-SVLDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRG----YFTQLVQDLAAH 189
            |..  |.:..... |::|.| :.|.|:.:..:..|.....|:...:|.|    ::||:|...:..
 Frog   118 GQN--LSVHSGRYRSIVDLV-KGWYDERQHYSFPHPRECNPSCPNKCTGAVCTHYTQMVWASSNR 179

  Fly   190 VGCAMMLRK-----GQTSGLYQYGVLCHFS-RGKIANELVYRASAHPGSRCYAGTHSIYEGLCS 247
            :|||:.:..     |.|.....| ::|::| :|....|..|:.    |..|.|...| |.|:||
 Frog   180 IGCAVNICTNINVWGSTWRQASY-LVCNYSIKGNWIGEAPYKL----GRPCSACPPS-YGGVCS 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30486NP_725234.2 CAP_euk 61..214 CDD:349399 39/158 (25%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 39/158 (25%)

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