DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG30486 and crispld1a

DIOPT Version :9

Sequence 1:	NP_725234.2	Gene:	CG30486 / 246645	FlyBaseID:	FBgn0050486	Length:	263	Species:	Drosophila melanogaster
Sequence 2:	XP_001920421.2	Gene:	crispld1a / 100149104	ZFINID:	ZDB-GENE-090612-1	Length:	508	Species:	Danio rerio

Alignment Length:	266	Identity:	62/266 - (23%)
Similarity:	91/266 - (34%)	Gaps:	89/266 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    42 DFDESCGSEAIIMKFPMHMRA----HLLAVLNDFRNTVAKGQYPHLRPASRMATLRWHEELAGLA 102
            |.|:..|..  :|:.....||    .:.|:| |..|.:....||   |||.|..:.|..||...|
Zfish    43 DADDDAGDR--VMERQRGKRAITASDMQAIL-DLHNKLRGQVYP---PASNMEYMVWDNELERSA 101

  Fly   103 KFALRRCDYIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISVLDFV-----------------LQ 150
            :.....|                       .|   |..|..:|..:                 :|
Zfish   102 EEWAETC-----------------------LW---EHGPAGLLPQIGQNLGVHWGRYRPPTSHVQ 140

  Fly   151 FWMDDVKGCTMAHINAEKPAKDGQCRG----YFTQLVQDLAAHVGCAM-----MLRKGQTSGLYQ 206
            .|.|:||..:..:.....|....:|.|    ::||||...::.:|||:     |...||......
Zfish   141 AWYDEVKDYSFPYPQECNPHCPFRCSGPVCTHYTQLVWATSSRIGCAINVCYNMNVWGQIWAKAV 205

  Fly   207 YGVLCHFS-RGKIANELVYRASAHPGSRCYAGTHSIYEGLC--------------SPEEH----- 251
            | ::|::| :|   |...|....| |:.|.|...| |.|:|              ||.|.
Zfish   206 Y-LVCNYSPKG---NWWGYAPYKH-GTSCSACPPS-YGGVCRENLCYKGDGKNRQSPSEETHERN 264

  Fly   252 -VNPNA 256
             :.|.|
Zfish   265 SIEPEA 270

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG30486	NP_725234.2	SCP_euk	61..214	CDD:240180	41/182 (23%)
crispld1a	XP_001920421.2	SCP_euk	68..212	CDD:240180	39/174 (22%)
		LCCL	298..381	CDD:128866
		LCCL	401..500	CDD:281766
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170585697
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.750