DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG30480 and ro

DIOPT Version :9

Sequence 1:	NP_001260976.1	Gene:	CG30480 / 246640	FlyBaseID:	FBgn0050480	Length:	920	Species:	Drosophila melanogaster
Sequence 2:	NP_524521.1	Gene:	ro / 43234	FlyBaseID:	FBgn0003267	Length:	350	Species:	Drosophila melanogaster

Alignment Length:	250	Identity:	49/250 - (19%)
Similarity:	74/250 - (29%)	Gaps:	106/250 - (42%)

- Green bases have known domain annotations that are detailed below.

  Fly    40 PKHRHHHHHHRHHHHHERQENVEVVATEEVILVENAPKSRKHHHHKQRTSPPPPLPQ--TSPPFL 102
            |..:|..||  |||||..|            ||         |......||||.:..  .:.|.|
  Fly   118 PSQQHQQHH--HHHHHPPQ------------LV---------HQKLSYVSPPPAIAAGGAANPVL 159

  Fly   103 TPTEEVGFNVVWEPQAFWNQPSPNPSTDLDLSQDNEVVDAVETMDTTSASDEFTTVVFQSETKES 167
                         |.||   |:..||                   ....|..|:..:.:...||.
  Fly   160 -------------PHAF---PAGFPS-------------------DPHFSAGFSAFLARRRRKEG 189

  Fly   168 IRETQKHTRVVEEEIIIDQLDPPPYAPPPLQVQTGFFPVAQQPPLSPIAEVVQTDVVAESVEPPL 232
            .:..|:.|...|:.:.::                              .|..:.:.::.|....|
  Fly   190 RQRRQRTTFSTEQTLRLE------------------------------VEFHRNEYISRSRRFEL 224

  Fly   233 PPTGYIPRINLKPTETIVE--------NVEVIVPAQIQQE-PEFIPQPGFVARIV 278
            ..|       |:.|||.::        ..:.|..|||.|. ..|:...||::.|:
  Fly   225 AET-------LRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVANGFMSSIM 272

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG30480	NP_001260976.1	PRK10263	<499..>757	CDD:236669
ro	NP_524521.1	Homeobox	196..247	CDD:278475	10/87 (11%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439762
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930