DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30480 and zen2

DIOPT Version :10

Sequence 1:NP_725409.1 Gene:CG30480 / 246640 FlyBaseID:FBgn0050480 Length:920 Species:Drosophila melanogaster
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:268 Identity:49/268 - (18%)
Similarity:86/268 - (32%) Gaps:101/268 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 CVESIVENIEVTPSQPVLQISDQSVVPAGFVESAVEDIQVIETEDPPFLLPTENDFTAQAGNVES 450
            |||.   |:|..|:     .:.:|...:....:|...:|:||.|....|    |.:.|:.     
  Fly    24 CVEL---NVEAAPT-----ATTRSSEKSKRSRTAFSSLQLIELEREFHL----NKYLART----- 71

  Fly   451 LIENIEVTTEVDLTLRQ---------SEQIENLPRSGFVESIVENIEVTQEVDPPQPAVPSDVVT 506
              ..||::..:.||.||         .:..::..|.|.:.::..:|.::.:..       .|:..
  Fly    72 --RRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSS-------EDLQK 127

  Fly   507 QSGLVESIVE----NIEVTEIVDIQAPAPPQTGFVESVVERLDVTEEVEPSVRPPLPLSYPPRSG 567
            ...:||.::.    |:|...:                        .:|:..|             
  Fly   128 DDQIVERLLRYANTNVETAPL------------------------RQVDHGV------------- 155

  Fly   568 FVESIVENIEVEQVTPSYQ---------PPQQIVPQSGFVETFVEDIEIKESALPPIQNGYAPQA 623
                    :|..|:||.||         |....:||..|.|.   |.....|.|     |..|..
  Fly   156 --------LEEGQITPPYQSYDYLHEFSPEPMALPQLPFNEF---DANWASSWL-----GLEPTI 204

  Fly   624 GVVETIVE 631
            .:.|.::|
  Fly   205 PIAENVIE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30480NP_725409.1 None
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 14/66 (21%)

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