DRSC/TRiP Functional Genomics Resources

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Protein Alignment ave and Samd12

DIOPT Version :10

Sequence 1:NP_725413.1 Gene:ave / 246638 FlyBaseID:FBgn0050476 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001425466.1 Gene:Samd12 / 362910 RGDID:1561402 Length:173 Species:Rattus norvegicus


Alignment Length:96 Identity:39/96 - (40%)
Similarity:60/96 - (62%) Gaps:6/96 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TQNKTRTKTTRPKAVYLWTVSDVLKWYRRHC-GEYTQYEQLFAQHDITGRALLRITDSSLQRMGV 72
            |......|.::|  |.|||..||.||.::|| .:|..|.:.|.|||||||||||:||..|:||||
  Rat    62 TAKSATVKLSKP--VALWTQQDVCKWLKKHCPNQYHIYSESFKQHDITGRALLRLTDKKLERMGV 124

  Fly    73 TDNRDREAIWREIVKQRLKTDIMEIRDMERL 103
            .....|:.|.:::::.:::.   |:|:::.|
  Rat   125 AQENQRQHILQQVLQLKVRE---EVRNLQLL 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aveNP_725413.1 SAM_aveugle-like 21..94 CDD:188909 33/73 (45%)
Samd12NP_001425466.1 None

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