DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52b and Ir100a

DIOPT Version :9

Sequence 1:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:473 Identity:96/473 - (20%)
Similarity:169/473 - (35%) Gaps:135/473 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NVDVAVVLVSDSMNFEWNFSSLTLILSCGPDIDNGGPNSTSIKLQRNRRLVL-LKEDFQPSNI-- 125
            |.|...||.|.....|   ..|.|.|....|   ||.:.....:|....::: .|::..||..  
  Fly    22 NTDHKQVLTSIVKQLE---GGLELHLRTSED---GGNDLVQFLMQEKSSIIISAKQEEVPSRAKI 80

  Fly   126 ------------------CNIYTQKEQYNIALVRENFTKSKSIYTCRYFQD-------PNVDEVN 165
                              .:::.....|.:||  ||.|....:....:..|       ..:..|.
  Fly    81 MRHHFFIFDGVHQMQEIRTSLFNTDGFYILAL--ENNTIEDDVLLMEFAADVWLQHGHSRIYYVQ 143

  Fly   166 LSGTKPIFIEQF-------QNMKGKAIRIVPDLLPPRVMLY-------QDANDGELKMI---GYV 213
            ||....:....|       |:.|..: ||..||....:.:|       ....|||.|::   |..
  Fly   144 LSKKSVLLFNPFLQRLVVVQDSKTYS-RIYKDLEGYHLRIYIFDSVYSSVIGDGENKVLSVTGAD 207

  Fly   214 ANLITNFAQKVNATLQLDFLKPSTSITEISRMAKDD-----------ELDM---GITLEASLNTS 264
            |.|....|:::|.|  .||:.|...... .|:|..:           |:|:   |..::..| |:
  Fly   208 AKLAKTVARQLNFT--ADFVWPDDEFFG-GRLANGEYSGGVGRAHRGEVDIIFAGFFIKDYL-TT 268

  Fly   265 NLETSSYPYLLTSYCLMVQVPAKFPYNL--VYALIVDPLVLGIIFVLFLLLSVLLIYSQKMSWQD 327
            :::.|:..| :...||.|:...:.|.::  ::|:.:|      :::.|||:.:|    ..:.|..
  Fly   269 HIQFSAAVY-MDELCLYVKKAQRIPQSILPLFAVHMD------VWLCFLLVGLL----GALVWLI 322

  Fly   328 LSVANILLN-----DKS----------------------LRGLLGQSFPFPLNASKKLRLIFTIL 365
            |...|::|.     |.|                      :|..:|:..||     ...|:....|
  Fly   323 LRAVNLILGIEGVPDGSRATRISYFGAARRIFVDTWVIWVRVNVGRFPPF-----HSERIFVASL 382

  Fly   366 CFASIMLTTMYEAYLQSFFTNPPSEPEICSFQDVGSYNRRIAMSALEVNGL-IKTNNSHFREIRM 429
            |..|::...:.|:.|.:.:..|      ..::||.:      :..|:.:|. |...:..|:    
  Fly   383 CLVSVIFGALLESSLATVYIRP------LYYRDVNT------LRELDESGQPIYIKHPAFK---- 431

  Fly   430 DDLEIFDNMPECYELRDA 447
            ||| .:.:..|.|...||
  Fly   432 DDL-FYGHNSEVYRRLDA 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52bNP_725469.2 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 10/47 (21%)
Lig_chan <439..580 CDD:278489 4/10 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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