DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52b and Ir68b

DIOPT Version :9

Sequence 1:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster


Alignment Length:560 Identity:107/560 - (19%)
Similarity:199/560 - (35%) Gaps:182/560 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 YTQKEQYNIALV-RENFT-------------------------KSKSI--YTCRY--FQDPNVDE 163
            :.:|..|.:|:. |||.|                         |.|.:  |..|:  |.||    
  Fly   141 WAKKLLYGLAITGRENGTFDFDPFAWGGLQVIQRLDGEVPYARKVKDLRGYPLRFSMFTDP---- 201

  Fly   164 VNLSGTKPIFIEQFQNMKGKAIRIVPDLLPPRV-MLYQDANDGELKMI------GYVANLI---T 218
            :......|:....:|.:.|.|.|:|.::|...| .::.:.|:...:.:      |.|::::   |
  Fly   202 LMAMPRSPVETAGYQAVDGVAARVVGEMLNASVTYVFPEDNESYGRCLPNGNYTGVVSDIVGGHT 266

  Fly   219 NFAQKVNATLQLDFLKPSTSITEISRMAKDDELDMGITLEASLNTSNLETSSYPYLLTSYCLMVQ 283
            :||.  |:...||.:.|:..:.                              |||...:..|:|.
  Fly   267 HFAP--NSRFVLDCIWPAVEVL------------------------------YPYTRRNLHLVVP 299

  Fly   284 VPAKFPYNLVYALIVDPLVLGIIFVLFLLLSVLLIYSQKM--------------SWQDL------ 328
            ..|..|..|::..:....|..::.|..|::.::....|::              :|.::      
  Fly   300 ASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVIQFQATWYEILEMFGK 364

  Fly   329 ----SVANILLNDKSLRG-LLGQSFPFPLNASKKLRLIFTILCFASIMLTTMYEAYLQSFFTNPP 388
                ..|..|.:..|:|. |:|.             ::|      |.:|:|:|.|.|:|.|..|.
  Fly   365 THVGEPAGRLSSFSSMRTFLMGW-------------ILF------SYVLSTIYFAKLESGFVRPS 410

  Fly   389 SEPEICSFQDVGSYNRRI---------AMSALEVN--GLIKTNN---------SHFREI--RMDD 431
            .|.::....|:...:..|         ..|||..:  ||::..:         |:::.:  |.|.
  Fly   411 YEEQVDRVDDLVHLDVHIYAVTTMYDAVRSALTEHQYGLLENRSRQLPLGIATSYYQPVVRRRDR 475

  Fly   432 LEIFDNMPECYELRDAFNLSYNYVVTGDRWRSYAEQQTLFKEPVFYFARDLCFSRLIFLSVPLRR 496
            ...|  :...:..||...::|:         |.||:      |.::.||:  :.|.:..:..|.|
  Fly   476 RAAF--IMRDFHARDFLAITYD---------SQAER------PAYHIARE--YLRSMICTYILPR 521

  Fly   497 HLPYRHLFDEHMMQQHEFGFVNYWMSHSFFDMV-RLGLTS-----LKDL---------SRPLAYT 546
            ..|:.|..:.......|.||..:|..   .|:: |:|.:.     |:||         |..||..
  Fly   522 GSPFLHRLESLYSGFLEHGFFEHWRQ---MDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIR 583

  Fly   547 PS---LLMDDISWIMKIYLAAIVLCVFCFLLEIGVDKWKR 583
            ..   |.:|.:.....::...|.:....|.:|.....|:|
  Fly   584 NKKVVLTLDILQGAFYLWSVGIGISCLGFAVEHAHWFWRR 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52bNP_725469.2 None
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 60/314 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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