DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52b and Ir68a

DIOPT Version :9

Sequence 1:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:650 Identity:124/650 - (19%)
Similarity:203/650 - (31%) Gaps:222/650 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NELINLLLKLRNEEFYDTLLVYGKDCEFHSVI-------------------KNVDVAVVLVSDSM 76
            ||..:|....|..|.: ...:...|||.:.:.                   .|:....||:.|..
  Fly    87 NESDDLQRPSRQVELF-VKAIKSSDCELNVITILNGWQVQRFLGYIYDNRSLNMQKKFVLLHDLR 150

  Fly    77 NFEWNFSSLTLILSCGPDIDNGGPNSTSIKLQRNRRLVLLKEDFQPSNICNIYTQKEQYNIALVR 141
            .||.:...|..:.     ||     :..:|.|.:.:..:....| |..:..:...|   |||   
  Fly   151 LFESDMIHLWSVF-----ID-----AIFLKRQLDNKYTISTIAF-PGILSGVLVMK---NIA--- 198

  Fly   142 ENFTKSKSIYTCRYFQDPNVDEVNLSGTK-PIFIEQ-------------FQ-------NMKGKAI 185
             |:...|.:.....|.|..   .||.||. |:.|.:             ||       |..|||:
  Fly   199 -NWELGKGLNGRILFADKT---SNLFGTSLPVAISEHVPMVLWANATKSFQGVEVEIMNALGKAL 259

  Fly   186 RIVPDLLPPRVMLYQDAN------DGELKMIGYVANLITNFAQKVNATLQLDFLKPSTSITEISR 244
            ...|....|.    |..|      ||... :.|.:.....:||  |.| .:|.:.........:|
  Fly   260 NFKPVYYKPN----QTENMDWTELDGGAS-VAYGSGNPDGYAQ--NGT-HIDSMLVDEVAAHSAR 316

  Fly   245 MAKDDELDMGITLEASLNTSNLETSSYPYLLTSYCLMVQVPAK------------FPYNLVYALI 297
            .|..|.....:.|:       |...|.|:  ...||....|..            |...:...::
  Fly   317 FAIGDLHLFQVYLK-------LVELSAPH--NFECLTFLTPESSTDNSWQTFILPFSAGMWVGVL 372

  Fly   298 VDPLVLGIIFVLFLLLSVLL-----------------------IYSQKMSW-------------- 325
            :...|:|.:|.....|:.::                       || :::|:              
  Fly   373 LSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIY-RRISFRIAISRYRSSKGDR 436

  Fly   326 --QDL--SVANILLNDKSLRGLLGQSFP-FPLNASKKLRLI---FTILCFASIMLTTMYEAYLQS 382
              :||  ...|.:|...|:  ||..:.| .|.|  ..||::   :.|.|   |:|...|.|...:
  Fly   437 MPRDLFDGYTNCILLTYSM--LLYVALPRMPRN--WPLRVLTGWYWIYC---ILLVATYRASFTA 494

  Fly   383 FFTNPPSEPEICSFQDV----------GSYNRRIAMSA-----------LEVNG--------LIK 418
            ...||.:...|.:.:|:          .:.||:..:.|           :||.|        :.|
  Fly   495 ILANPAARVTIDTLEDLLRSHIPPSTGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSRIAK 559

  Fly   419 ------TNNSHFREIRMDD-----LEIFDNMPECY-------------ELRDAFNLSYNYVVTGD 459
                  .|..:.|.:|:.|     |.|   |.||.             .|:...:.|..::..|.
  Fly   560 GQCAYYDNEFYLRYLRVADESGSALHI---MKECVLYMPVVLAMEKNSALKPRVDASIQHLAEGG 621

  Fly   460 ---RW----------RSYAEQQTLFKEPVFY--FARDLCFSRLIFLSVPLRRHLPYRHLFDEHMM 509
               :|          .:.|:|:.|.....|:  |.. |....:|.:...|.....::|:..:|.|
  Fly   622 LIAKWLKDAIEHLPAEALAQQEALMNIQKFWSSFVA-LLIGYVISMLTLLAERWHFKHIVMKHPM 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52bNP_725469.2 None
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 48/242 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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