DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52b and Ir56c

DIOPT Version :9

Sequence 1:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster


Alignment Length:553 Identity:117/553 - (21%)
Similarity:205/553 - (37%) Gaps:114/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 GPNSTSIKLQRNRRLVLLKEDFQPSNICNIYTQKEQ------YNIALVRENFTKSKSIY------ 151
            |.::|...:..|..:.::....:.:::..::|...:      ::..|:..:|..|..||      
  Fly    45 GKSATQTVVNNNTEMRMIYSSARRNHMSFVFTTGAEDPIMKVFSKVLLGRHFYVSMVIYVDKVGD 109

  Fly   152 --------TCRYFQD--------PNVDEVN-LSGTKPIFIEQFQN------MKGKAIRIV----- 188
                    |..|.|.        .:::.|| |.|.....:..|:|      ..||..:.|     
  Fly   110 MHPIYDLLTFAYNQQFFNSMVHFESMEGVNQLFGVSKFPVMSFENRTDFLKYMGKIWKQVQNARS 174

  Fly   189 ------------PDLLPPRVMLYQDANDGELKMIGYVANLITNFAQKVNATLQLDFLKPSTSITE 241
                        .||  |.:...|...||.      ...:|..|.:.:|.:.:...:.|.:...:
  Fly   175 DVGGFGFTTPLRQDL--PHLFQSQGHYDGS------TYRIIETFVRFINGSFKELIMPPDSLGGQ 231

  Fly   242 ISRMAKD-----DELDMGITLEA---SLNTSNLETSSYPYLLTSYCLMVQVPAKFPYNLV--YAL 296
            :..| ||     .|..|.....|   .::...|| .|||.|:..:||||.:     ||.|  |..
  Fly   232 VINM-KDALQLIRERKMEFCAHAYALFMSDEELE-KSYPLLVVQWCLMVPL-----YNSVSTYFY 289

  Fly   297 IVDPLVLGI-IFVLFLLLSVLLIYSQKMSWQDLSVANILLNDKSLRGLLGQSFPFPLNASKK--- 357
            .:.|....: .|.|..||:::|:   ::.|     ..:.......||.:..||.:.:|...:   
  Fly   290 PLQPFDWNVWFFALGALLALVLL---ELMW-----LRMFGGWSGYRGAVLNSFCYIINVPIEGQL 346

  Fly   358 -----LR-LIFTILCFASIMLTTMYEAYLQSFFTNPPSEPEICSFQDVGSYNRRIAMSALEVNGL 416
                 || |:...:.|....|:..|.:.|.|..|......:|.:..|:.|....:.:...|:..|
  Fly   347 QQPCLLRFLLLATVFFHGFFLSAYYTSNLGSILTVNLFHAQINTMNDIVSAQLPVMIIDYEMEFL 411

  Fly   417 IKTNNSHFREIRMDDLEIFDNMPECY--ELRDAFNLSYNYVVTGDRWRSYAEQQTLFKEPVFYFA 479
            :..|    :|:..:.||:...:....  |.:.:||.|:.|.||.|.|....|||...|:.:|..:
  Fly   412 LNLN----KELPQEFLELLRPVDSAVFSEHQTSFNSSFAYFVTEDHWEFLDEQQKHLKQRLFKLS 472

  Fly   480 RDLCFSRLIFLSVPLRRHLPYRHLFDEHMMQQHEFGFVNYWMSHSFFDMVRLGLTS-LKDLSRPL 543
             .:||.. ..|:.||:.........:....:.|..|.:|::...||...:..||.. :.|...  
  Fly   473 -SICFGS-YHLAFPLQMDSSLWRDIEYFTFRIHSSGLLNFYARSSFGSALHAGLVQRMPDTQE-- 533

  Fly   544 AYTPSLLMDDISWIMKIYLAAIVLCVFCFLLEI 576
             ||.       :.:..:.:|.|:|.|..||..|
  Fly   534 -YTS-------AGLQHLAIAFILLLVMSFLAGI 558



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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