DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52b and Ir48c

DIOPT Version :9

Sequence 1:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:635 Identity:128/635 - (20%)
Similarity:244/635 - (38%) Gaps:143/635 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVILLCFLGYMAAHIADISVQNQSLMDNELINLLLKLRNEEFYDTLLVYGKDCEFHSVIKNVDVA 68
            :::::.||..::: |.|..:.:.|......|.:...|.| :.||          |..:..|....
  Fly     6 IILIIIFLRIVSS-IPDTIISHLSAELQIKIQIYFGLGN-DLYD----------FSRLDGNYQKI 58

  Fly    69 VVLVSDSMNFEWNFSSLTLILSCGPDIDNGGPNSTSIKLQRNRRLVLLKEDFQPSNICNIYTQKE 133
            ::..:.|..|:.......||:               |:|:|:..|.|...|     :...|....
  Fly    59 IISHNISEEFKTYHDEPVLII---------------IRLERDLNLNLATLD-----VLRSYLTDR 103

  Fly   134 QYNIALVRENFTKSKSIYT--CRYFQDPNVDEVNLSGT---------------KPIFIEQF---- 177
            |||..|:.:|..::.:.|.  .:.:.:....:|.:..:               :|..::::    
  Fly   104 QYNDILLIDNDEENLNSYVDIRKAYWNAGFSQVLIYNSQQRTWSIKPYPYLQIRPTSLKEYIENR 168

  Fly   178 --QNMKGKAIRIVPDLLPPRVMLYQDANDGE-LKMIGYVANLITNFAQKVNATLQL----DFLKP 235
              :|:.|..:|::....||...:.:|...|. .:..|.:..::..||.::|||.|.    :|.:.
  Fly   169 NTRNLMGYPLRVLVTNDPPHCFVDKDELPGSPNRYKGSIVTMLKIFADQLNATFQANPFREFRRY 233

  Fly   236 STSITEISRMAKDDELDMGITLEASLNTSNLETSSY----PYLLTSYCLMVQVP---AKF----- 288
            ||:  :..:|..|||:|       :..:..:.|.:|    |..|....:|....   .||     
  Fly   234 STA--DCVQMVSDDEID-------ACGSIFIRTYTYATSQPVRLNRVVIMAPFGNPIEKFYYFFR 289

  Fly   289 PYNLVYALIVDPLVLGIIFVLFLLLSVLLIYSQKMSWQDLSVANILLNDKSLRGLLGQSFPFPLN 353
            |::| |..|    ..|||.|...::..||   .:..:::.:|...||  .:::.||.:....|.:
  Fly   290 PFDL-YVWI----GTGIIVVYIAVMGSLL---HRWHFKEWNVGQYLL--LAVQTLLNRELSLPQS 344

  Fly   354 ASKKLRLIFTILCFASIMLTTMYEAYLQSFFTNPPSEPEICSFQDVGSYNRRIAMSALEVNGLIK 418
            :|....::..:|.....:|:.:|.|.|....|....:..|.:..|         :.|..||.|::
  Fly   345 SSGSKFMLLLLLFAIGFILSNLYVALLSMMLTTKLYQRPIENLAD---------LKAANVNILLQ 400

  Fly   419 TNN-------SHFREIRMDDLEIFDNMPECYELRDAFNLSYNYVVTGDRWRSYAEQQTLFK---- 472
            |:|       ....|:|...|.:.::  :..|.|:..:.||.||.:.||...|..||...:    
  Fly   401 THNIRPNSVYGSSEELRERFLLVEES--QHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRM 463

  Fly   473 ----EPVFYFARDLCFSRLIFLSVPLRRHLPYRHLFDEHMMQQHEFGFVNYWMSHSFFDMVRLGL 533
                .||.|    ....::|..:..|.:|      :::|:.:..|.|..|..:.......|:.|.
  Fly   464 KKLSNPVGY----TWAVQVIKQNWVLEKH------YNDHVQRFFETGLQNKLVDDVHELAVKAGF 518

  Fly   534 TSLKDLSRPLAYTPS-------LLMDDISWIMKIYLAAIVLCVFCFLLEI 576
                     |.:.|:       |.::||.....:......|.|.|||:|:
  Fly   519 ---------LHFFPTQTQTIEPLRLEDIVMAAMVLGGGHALAVICFLVEL 559



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C043
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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