DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52b and Ir40a

DIOPT Version :10

Sequence 1:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:437 Identity:79/437 - (18%)
Similarity:146/437 - (33%) Gaps:129/437 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 DMGITLEA---------SLNTSNLETSSYPYLLTSYCLMVQVPAK---FPYNLVYALIVDPLVLG 304
            |:|::.|.         :|..|....:..|..|.. .|.:..|.|   :|:.::..:...|:..|
  Fly   320 DVGLSWERRKAIEFSFFTLADSGAFATHAPRRLNE-ALAIMRPFKQDIWPHLILTIIFSGPIFYG 383

  Fly   305 IIFVLFLLLSVLLIYSQKMSWQDLSVANI----------------LLNDKSLRGLLGQSFPFPL- 352
            ||         .|.|..:..|.:..|.::                ||..|....|.....|..| 
  Fly   384 II---------ALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLF 439

  Fly   353 ----------------------NASKKLRLIFTILCFASIMLTTMYEAYLQSFFTNPPSEPEICS 395
                                  ..:|.|.:::.|.  |:.:|..:|.|.|.|.|..|..||.|.:
  Fly   440 QKCIWFTLRLFLKQSCNELHNGYRAKFLTIVYWIA--ATYVLADVYSAQLTSQFARPAREPPINT 502

  Fly   396 FQDVGSYNRRIAMSALEVNGLIKTNNSHFREIRMDDLEIFDNMPECYELRDAFNLSYNYVVT--- 457
            .|.:.:             .:|......:.|.....||:.:|..|.:  |..:.|....|:.   
  Fly   503 LQRLQA-------------AMIHDGYRLYVEKESSSLEMLENGTELF--RQLYALMRQQVINDPQ 552

  Fly   458 -----------------GDRWRSYAEQQTLFKEPVFYFARDLCFSRLIFL---SVPLRRHLPYRH 502
                             |:.......::|||.....|.:.:...|:.::.   :|.::...|:..
  Fly   553 GFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAVQIGCPFLG 617

  Fly   503 LFDEHMMQQHEFGFVN------YWMSHSFFDMVRL--GLTSLKD---LSRPLAYTPSLLMD-DIS 555
            ..:..:||..|.|.::      |...:...:..|:  |....|:   .||..:|..:::.. ::.
  Fly   618 SLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVISPLNLR 682

  Fly   556 WIMKIYL--------AAIVLCVFCFLLE---IGVDKWKRWMKFRNLQ 591
            .:...::        |.::|     |||   |.:|:.:.||....||
  Fly   683 MLQGAFIALGVGSLAAGVIL-----LLEIVFIKLDQARLWMLCSRLQ 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52bNP_725469.2 None
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166 3/15 (20%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 17/80 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 25/155 (16%)

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