DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52b and Ir10a

DIOPT Version :9

Sequence 1:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster


Alignment Length:684 Identity:127/684 - (18%)
Similarity:237/684 - (34%) Gaps:199/684 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FLGYMAAHIADISVQNQSLMDNELINLLLKLRNEEFYDTLLVYGKDCEFHSVIKN---------V 65
            ||.:|    .|:...|.:.::..|:.....|...|.:   |..|.|   |...:|         .
  Fly     8 FLLFM----LDLKTLNLTRLNGLLVEPTRDLPQLELW---LRAGSD---HQDAENPYVQWFLLRT 62

  Fly    66 DVAVVLVSDSMNFEW-----NFSSLTLILSCGPDIDNGGPNSTSIK-------LQRNRRLVLLKE 118
            ::.:.:|:...|..|     ...:|.|::|....:.|.|..:...|       |....:.:...|
  Fly    63 EIPLSIVTYQENRYWMDDPFGRRNLVLVMSLDQLLTNRGAAAPIQKASTFFYILADQDKDLSADE 127

  Fly   119 DFQPSNIC-NIYTQKEQYN-IALVREN------FTKSKSIY--TCRYFQDPNVDEVNLSGTKPIF 173
            ..:....| .::||.:.|| ..|.|:.      |.:..|.:  ..||:....:|::         
  Fly   128 QLRLEGSCRQLWTQHKVYNRFFLTRDGVWIYDPFKRRDSAFGRLVRYYGSETLDKL--------- 183

  Fly   174 IEQFQNMKGKAIRIVPDLLPPRVMLYQ--------DANDGELKMIGYVANLITN-FAQKVNATLQ 229
              .|::|.|         .|.|:.:::        |...|.|..:..|..|:.. ..:::|.|:.
  Fly   184 --LFRDMAG---------YPLRIQMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLRERLNFTML 237

  Fly   230 LD------FLKPSTSIT---EISRMAKDDELDMGITLEASLNTSNLETSSY---PYLLTSY---- 278
            |.      |.:.|.:.:   .|..:.||. ||:.:|             .:   .||:..|    
  Fly   238 LQQPEKKYFGERSANGSYNGAIGSIIKDG-LDICLT-------------GFFVKDYLVQQYMDFT 288

  Fly   279 --------CLMVQVPAKFPYNL--VYALIVDPLVLGIIFVLFLLLSVLLIYSQKMSWQDLSVANI 333
                    |:.|...::.|.::  ::|:..| :.||.         ||..::..:.|..|.|.|:
  Fly   289 VAVYDDELCIYVPKASRIPQSILPIFAVGYD-IWLGF---------VLTAFACALIWLTLRVINL 343

  Fly   334 LLNDKSL--RGLLGQSFPF--------------PLNASKKLRLIFTILCFASIMLTTMYEAYLQS 382
            .|...||  :.::||:...              .|.||...|:....||..|::...::|:.|.:
  Fly   344 KLRIVSLGNQHIVGQALGIMVDTWVVWVRLNLSHLPASYAERMFIGTLCLVSVIFGAIFESSLAT 408

  Fly   383 FFTNPPSEPEICSFQDVGSYNRRIAMSALEVNGL--IKTNNSHFREIRMDDLEIFDNMPECYELR 445
            .:.:|      ..::|:.:      |..|:.:||  :...:|     ..|||...:..|....|.
  Fly   409 VYIHP------LYYKDINT------MQELDESGLKVVYKYSS-----MADDLFFSETSPLFASLN 456

  Fly   446 DAFNLSYNYVVTGD------RWRSYA------------EQQTLFKE-------PVFYFARDLCFS 485
            .  .||:|..:..|      |:|:.|            ...||.::       |.:|        
  Fly   457 K--KLSWNRDLRADVIDEVARFRNKAGVSRYTSLILESSHFTLLRKIWVVPECPKYY-------- 511

  Fly   486 RLIFLSVPLRRHLPYRHLFDEHMMQQHEFGFVNYWM--SHSFFDMVRLGLTSLKDLSRPLAYTPS 548
               .:|..:.|..|:....:..:::....|.:..|:  ..|:.|:.........|....|...  
  Fly   512 ---TISYVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAESELVRV-- 571

  Fly   549 LLMDDISWIMKIYLAAIVLCVFCFLLEIGVDKWK 582
            |.:.|:.....:.:...:|....||.|  ..:||
  Fly   572 LTIGDLQLAFYVVIGGNLLAFLGFLAE--HFRWK 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52bNP_725469.2 None
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 16/87 (18%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 24/105 (23%)
Lig_chan 319..587 CDD:278489 57/309 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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