DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52b and Ir7c

DIOPT Version :9

Sequence 1:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster


Alignment Length:503 Identity:107/503 - (21%)
Similarity:181/503 - (35%) Gaps:130/503 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 YTCRYFQDPNVDEVNLSGTKPIFIEQFQNMKGKAIRIVPDLLPPRVMLYQD-ANDGELKMIGYVA 214
            ||.  |||..........|||:|..:..||.|..:.:......|.|::..| ...|...:.|...
  Fly   184 YTA--FQDLAAPANGFGLTKPLFPRKLTNMHGCEMVVATFEHRPYVIIEDDPKTPGGRSIHGIEG 246

  Fly   215 NLITNFAQKVNATLQLDFLK--------PSTSITEISRMAKDDELDMG-ITLEASLNTSNLETSS 270
            .:..:.|:::|.|::|...|        |..:.|.|.:|..|.|:::. :....|...|:|...|
  Fly   247 LIFRSLAERMNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPS 311

  Fly   271 YPYLLTSYCLMVQVPA------------KFPYNLVYALIVDPLVLGIIFVLFLLLSVLLIYSQKM 323
            ..|  ||:.:::.||:            .|.| ::::.|:..|:.|  |||..||.:..:     
  Fly   312 TSY--TSFPIVLVVPSGGSISPMGRLTRPFRY-IIWSCILVSLIFG--FVLICLLKITAL----- 366

  Fly   324 SWQDLSVANILLNDK----------SLRGLLGQSFPFPLNASKKLRLIFTILCFASIMLTTMYEA 378
                ..:.|::|..:          ||.|.|....|    .....|.|..:....:::|...|..
  Fly   367 ----PGLRNLVLGRRNRLPFMGMWASLLGGLALYNP----QRNFARYILVMWLLQTLILRAAYTG 423

  Fly   379 YLQSFFTNPPSEPEICSFQDV--GSYNRRI--AMSALEVNGLIKTNNSHFREIRMDDLEIFDNMP 439
            .|.....:......|.|..:|  ..|..||  |:..:..:.:..||   |..:    |.:.::: 
  Fly   424 QLYLLLQDVEMRSPIKSLSEVLAKDYEFRILPALRTIFKDSMPTTN---FHAV----LSLEESL- 480

  Fly   440 ECYELRDAFNLSYNYVVTGDRWRSYAEQQTLFKEPVFYFARDLCFSRLIFLSVPLRRHLPYRHLF 504
              |.|||..:......:.         |.|:              ::..|.|.|.:|||..  |.
  Fly   481 --YRLRDEDDPGITVALL---------QPTV--------------NQFDFRSGPNKRHLTV--LP 518

  Fly   505 DEHMMQQHEFGFVNYWMSHSFF----DMVRLGLTSLKDLSRPLAYTPSLLMDDISWIMK------ 559
            |..|.....|    |...||:|    |.:.:.:.|    |..:|....:.||.|..:.|      
  Fly   519 DPLMTAPLTF----YMRPHSYFKRRIDRLIMAMMS----SGIVARYRKMYMDRIKRVSKRRNLEP 575

  Fly   560 -----------------IYLAAIVLCVFCFLLEIGVDKWKRWMKFRNL 590
                             :||.|:::    |:|||.....:|..:..|:
  Fly   576 KPLSIWRLSGIFVCCAGLYLVALIV----FILEILTTNHRRLRRAFNV 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52bNP_725469.2 None
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 14/61 (23%)
Lig_chan 343..593 CDD:278489 59/307 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.