DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52c and Ir87a

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_650290.2 Gene:Ir87a / 41654 FlyBaseID:FBgn0038153 Length:796 Species:Drosophila melanogaster


Alignment Length:573 Identity:105/573 - (18%)
Similarity:197/573 - (34%) Gaps:177/573 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LSCNFQDER---EENYRTLMKLQTSRRL--ILLKGHIKPESVCDFYSKKEQHNVAMVKENFYQLE 149
            ||.|..:..   ||.:|...:.:..|.|  ..|....:|.....|.:.:||    .|.:.:|.|:
  Fly   304 LSSNSSEPEAIIEEFFRAKFEDKFPRDLSGCPLTASFRPWEPYIFRNSEEQ----PVDDYYYGLQ 364

  Fly   150 VVYSCRLFQDQNYEKLNLFDGKS---IYKDQFRNMHGAPIRTLSDKEPPRTIPYIDSKTGEE-KF 210
                   ..:.:|...:...|:|   .|.|...:..||             ||..::::|.: |.
  Fly   365 -------GDEDDYNDTSPNYGESDDESYADPGEDGDGA-------------IPDTETQSGGKLKL 409

  Fly   211 KGYVGMLISQFVKKVNATMQIR----------EDLIKDDEEVSFV--------DITNFTSNDIL- 256
            .|....::....::::.:::::          :.||  |.|:..:        .|:.|.|:.|. 
  Fly   410 SGIEYEMVQTIAERLHVSIEMQGENSNLYHLFQQLI--DGEIEMIVGGIDEDPSISQFVSSSIPY 472

  Fly   257 ---DIGICEARTLEMSNYDAISYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLIIFCIC 318
               ::..|.||......:           :.|:|.......|            ||...::.|  
  Fly   473 HQDELTWCVARAKRRHGF-----------FNFVATFNADAGF------------LIGIFVVTC-- 512

  Fly   319 SVLIIYIQER----SYRSLT--------IRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVC 371
             .|::::.:|    ..|:|.        :..:|:|    :...||.||.      .|:.:|.|..
  Fly   513 -SLVVWLAQRVSGFQLRNLNGYFPTCLRVLGILLN----QAIPAQDFPI------TLRQLFALSF 566

  Fly   372 FSSLISTTMYTAYLQAFLWGPPIEPRLTSFDDVKKSRYTMAINIYEREFLEALNVSLEDVEIYDY 436
            ......:..|.::|.:.|..|....::.:..::..::.|:   :...|.:..||   :|.||:.|
  Fly   567 LMGFFFSNTYQSFLISTLTTPRSSYQIHTLQEIYSNKMTV---MGTSEHVRHLN---KDGEIFKY 625

  Fly   437 GKFSKLRSTFNTNYLFPVTALQWFTINEE--QKLFKYKIFY---------YCDAFCLNQFD---- 486
                 :|..|...|.. |..|.....||.  ..:.:...||         ||       ||    
  Fly   626 -----IREKFQMCYNL-VDCLNDAAQNEHIAVAVSRQHSFYNPRIQRDRLYC-------FDRRES 677

  Fly   487 ------ILSIPLRRHLPYR-DIFEEHMLLQKEFGLTKYWI-DQSYRDMIRANLTTFKD--FSPLL 541
                  .:.:|.:.||.:: :...:|::   |.|..:.|. |...|.||...:|..::  |..|.
  Fly   678 LYVYLVTMLLPKKYHLLHQINPVIQHII---ESGHMQKWARDLDMRRMIHEEITRVREDPFKALT 739

  Fly   542 ENDYIEVHNLYWVFTMYFVGMGMGL-----CFFILEILRPLRYWRNCKIKCEY 589
            .:.:...           :....||     |.|..|:         |.:|..|
  Fly   740 FDQFRGA-----------IAFSGGLLLVASCVFAFEL---------CYVKYVY 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52cNP_725470.1 None
Ir87aNP_650290.2 Periplasmic_Binding_Protein_Type_2 408..>475 CDD:304360 10/68 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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